KEGG   Paramecium tetraurelia: GSPATT00019334001
Entry
GSPATT00019334001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12857  Prp8 binding protein
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00019334001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00019334001
Spliceosome [BR:ptm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    GSPATT00019334001
 Complex C
   U5 SnRNP specific factors
    GSPATT00019334001
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 eIF2A Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_WDR75_2nd PROPPIN WD40_like DUF5711 WDR54 TetM_leader
Other DBs
NCBI-GeneID: 5038799
NCBI-ProteinID: XP_001453014
Genoscope: GSPATT00019334001
UniProt: A0DRF0
LinkDB
Position
undetermined
AA seq 368 aa
MSYGNKIIPSVPKFTEFKDYTSSQVLQMHTPHLLQKSHKQDLVLSSDYSMEVEPSKKYTL
QSAHLQLTGHQSEVYCVKYSPNGEYLITAGFDKKILIWDIYNNCTNIGILGSHKNAILDI
AWQYDGVRLFTASADKTVQIWDMETYLPLKKLKGHQSYVNCCFPSKRGQDLLATGGDEGY
TKVWDLRTRKLAFEIQGKYPITSVCFTENGERLYTGCLDNVIRCYDVRKQEIEYTLDNHT
DTVTGLAISNDGSYLLSNSMDMTVRTFDIRPYVQGKNRQVRVFTGATANTAEKNLLRCAW
SHDDSYVSAGSADKSVYIWDFNSKKVIHKLGGHQGTVNETAFSPKDKLIASASNDKTVII
GEIPEVTL
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtcttacggaaataaaataataccaagtgttccgaaatttacagagttcaaagattac
acttctagtcaagttttgcaaatgcatactccccatttattatagaaatcgcataaataa
gatctagtcttatcatctgattattcaatggaagtagaaccctccaaaaagtatacatta
taatctgctcatttgcaattaacaggacatcagagtgaggtgtattgtgtgaaatactct
ccgaatggtgaatatctgataacagctggatttgataagaaaattttaatttgggatatt
tataataattgcactaatatagggattttgggtagtcataaaaatgcaattcttgatatt
gcttggtaatatgatggggtgagattattcacagcatcagctgacaagactgtttaaata
tgggatatggaaacatatttacccttaaaaaagttaaaaggacattaaagttatgttaat
tgttgttttccctcaaaaagaggataagatctattagcaactggaggtgacgaaggctat
actaaagtgtgggatttaagaacaagaaagttagcatttgaaattcaaggcaagtatcct
attactagtgtttgtttcactgaaaatggagagagactatacacaggttgtttagacaat
gtcattagatgttatgatgtcagaaaataggagattgaatacaccttagataaccatacg
gatactgttacaggtttagctattagtaatgacggttcctatttattgagtaattcaatg
gatatgacagttagaacttttgatatcagaccttatgtctaaggaaaaaatagataagta
agggtatttacaggagcgacggcaaatacagcagaaaagaatctattaagatgtgcatgg
agtcacgatgattcatatgtatctgcaggatctgctgataagagtgtgtatatttgggat
tttaattcaaagaaagtaatccataaattaggaggccattaaggaactgttaatgaaaca
gcctttagtccaaaagataaattgatagcctcagctagtaatgataaaacagtaattatt
ggagaaatcccagaagtaactttgtga

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