Paramecium tetraurelia: GSPATT00019411001
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Entry
GSPATT00019411001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptm01009
]
GSPATT00019411001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00019411001
04131 Membrane trafficking [BR:
ptm04131
]
GSPATT00019411001
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00019411001
Enzymes [BR:
ptm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSPATT00019411001
Protein phosphatases and associated proteins [BR:
ptm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSPATT00019411001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GSPATT00019411001
Membrane trafficking [BR:
ptm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GSPATT00019411001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
GSPATT00019411001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
IPK
DUF6339
Motif
Other DBs
NCBI-GeneID:
5038875
NCBI-ProteinID:
XP_001453090
Genoscope:
GSPATT00019411001
UniProt:
A0DRM6
LinkDB
All DBs
Position
undetermined
AA seq
641 aa
AA seq
DB search
MQQIQEELANLKLDSNTTGFIYCEDFDKHFSNKKHFENPKRTQSIDQTIQNYLYQHDARK
KVEQLSQFNQCEIEYLRLVYDQAYIDFVEGLFEEVGDQKNQKEVVHLSDTYLCKTSAFTA
RKCVQAVLEGVDKILTKEWRNAFCSVRPPGHHSGHKAQPTGFCIYNNVAIAAKYARLKHK
VNKIVIFDWDVHHCDGTEFVFYEDPNTLVISIHRYDQGNFYPRSGDPEKIGGKNAEFKNV
NVGWNVTDGPAPGYDDYVYAFDRLLGPIIKEFAPDFIIISAGYDSAKGDPLGCIDNTPQG
YQYMTEKLSQICPKVLAVLEGGYNLDVTAECALATLQQLMGLPQDFPATIEPTKCGVSAV
TTTVDKHKEFWTCLTSNDLMEYQKKYIGQTADLISGGHLQSFQIKDDIIIKTTKKGEFQF
YSTLNDKTNPFYEENQRLIRFMPKLISLDQQSCSITMENLTYGLENGSIIDLKIGYKTYN
PNGSALKREKEIKKAKQCDQLIMGFRIAGVKVRDQIGALTVNKNGSDAYKWIRNDKQMKD
IIEQVFKSNYVEQPNKEALQGSIKFIQELIEALQKSKRVFRNTSILIIVDNMAKKFRIKW
IDFNYVMKLSDDSENPDAQVDNNILGGLKYLLSMLRQIDSK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtaataaatttaggaagaacttgccaatctcaagttagattcaaataccaccggcttt
atctattgcgaggactttgataaacacttttccaataaaaaacatttcgaaaatccaaaa
cgaacttaatccatagattaaaccatttaaaattatttatattaacatgatgcaagaaaa
aaggtggaatagttgtcatagtttaattaatgcgaaatcgagtacttgagattagtttat
gattaagcttacatagattttgttgagggattatttgaagaggtaggagatcaaaagaat
cagaaggaagttgttcacttgagtgatacttatttgtgcaaaacatcagcctttactgct
agaaaatgtgtctaagcagtcttagagggagttgataagatattaacaaaagaatggagg
aatgcattttgcagtgttagacctcctggtcatcacagtggacataaagcataaccaact
ggtttttgtatttataataatgttgctattgctgcaaaatacgcaagattaaaacataaa
gtcaataaaatagttatctttgattgggatgtccatcattgtgatggaacagagtttgta
ttttatgaagatccaaacacattagtgatttcaattcatagatatgatcaaggtaacttt
tatcccagaagtggggatcctgaaaaaataggaggaaaaaatgcagaatttaaaaatgtt
aatgttggatggaatgtaaccgatggacctgctccaggatatgatgactatgtctacgca
tttgatagattacttggtccgatcatcaaggaatttgcaccagatttcattatcataagt
gctggttatgattcagccaaaggagatcctcttggctgtattgataatactccctaaggc
tattaatacatgactgaaaagttatcctaaatctgtcctaaagtcttggctgttttggaa
ggaggatacaacttagatgttactgctgaatgtgctttagctacactttaataattgatg
ggattaccttaagattttccagccacaattgaaccaactaaatgcggagtcagtgcagtc
acaaccacagttgataagcataaggaattttggacttgtcttacttcaaatgatttgatg
gaatattaaaaaaagtatataggataaactgctgatttaatttcaggaggacatttacaa
tcatttcaaattaaagatgatatcattatcaagaccacaaaaaaaggagaattctaattc
tattcaacactaaatgataaaaccaatccattctatgaagaaaatcaaagacttattcga
ttcatgcctaaattgatttctcttgattaataatcctgttcgataaccatggaaaatcta
acttatggcctagagaatggatctattattgacttaaagataggctacaaaacatataat
ccaaatgggtcagcattaaaaagagaaaaagaaattaagaaggctaaacaatgcgaccag
ttaattatgggttttagaattgctggggttaaagtaagagattagattggagcactgact
gtcaataagaatggatctgatgcttataaatggataagaaatgataaataaatgaaagac
attattgagtaggttttcaaatcgaattatgtcgaataacctaataaagaggcactccaa
ggttctattaagtttatctaggaattaattgaagcacttcaaaaaagcaagagagttttt
cgaaatacttctattcttatcattgtggataacatggccaaaaagtttagaatcaaatgg
attgatttcaattatgttatgaagttatcagatgatagtgaaaatcctgatgcacaagtg
gataataatatattaggaggactcaaatatttattatcaatgttaagataaatagattcg
aaatga
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