Paramecium tetraurelia: GSPATT00019746001 Help Entry GSPATT00019746001 CDS       T01055                                  Name (RefSeq) hypothetical protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism ptm  Paramecium tetraurelia Pathway ptm03040   Spliceosome Brite KEGG Orthology (KO) [BR:ptm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     GSPATT00019746001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ptm03019]     GSPATT00019746001    03041 Spliceosome [BR:ptm03041]     GSPATT00019746001 Messenger RNA biogenesis [BR:ptm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      GSPATT00019746001 Spliceosome [BR:ptm03041]  Complex B   Other components    Prp19-related factors     GSPATT00019746001  Complex C     GSPATT00019746001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N TPR_14 HAT_PRP39_C Suf TPR_12 Mad3_BUB1_I TPR_19 TPR_2 TPR_6 TPR_8 RPN7 Motif Other DBs NCBI-GeneID:  5039230 NCBI-ProteinID:  XP_001453450 Genoscope:  GSPATT00019746001 UniProt:  A0DSN6 LinkDB All DBs Position undetermined AA seq 785 aa AA seqDB search MNAQLLHYKLEQLEVKGSSKFEVVFAAPDTQQEQYSRYTLRAWWIVLQAHRDKPYATRID LYERAFKYIPNCYKLWFNYLKEQLEDLGGRSTFLSNKFEEMITYFEKALVYMHKMPNIWL MYAEYCASLQKYTQTRNVYDRALQSLPVTQHHRIWKAYCQWISKTESITTAISIYNRYIK INPDYKEEYLDYLVSKQLWGKACQILVDILNDDQFNSASGKTKYDFMKYLCEIIARHPND LPIDAASIMKFGIKKYSDEIGQLWIKLADYYIKTGQFEQARDTFEDAVNNVLTVKDFSLV FNAYVKYEETIIQMLEDFDENDENQDDIDDTILSTKLDQLLKIKSSQDDEVQIEDELLLK MDRLDELLERRPILLNSCILRQNKYNVEEWLKRIVLVKGDERMALKTFTEALEIVEPNLA DNGKLSDIWIAYAKYYRDKGDWKTCNQIFHKGSKIEFKNIEEHVNLWSQWVETLLIDGFV NDSLTVIKQGLFKKYVKKLDKMTPSEMVPYSLQLWQLYLDLERNFGNFKSLRAAYKRMVE LKVVTPFIIINYAQLLEDNAFYEESFKVFEAGVQLFDWPALYDLWIVYITKFIQRYRGQK IERTRNLFETVIEQVPKDKNRIFYLMYGEFEEQYGLLNHAIEIYDRMVFNVEYQDKMEAY NIYIAKVALYLGITKTRPVFESAIENLQEAELIQMGLRLAQLERKFGEIDRARAVYIHIS QFSDPRFDDFGLWKTWENFELHHGNEDTYKEFRRISKSVVAKFSLMPPDPKKIKERVEKG QLGQV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgaatgcataattgcttcactataaattggaatagttggaagtcaagggtagttcaaaa ttcgaagtcgtttttgctgcccctgatacccaacaagaataatattcaagatatacattg agggcatggtggattgtattataggcgcatcgagataaaccatatgcaactagaatagat ttgtatgaaagggcctttaaatacattccaaattgttataaattatggttcaattatttg aaggaataactagaagatttgggaggtagaagcacattcttatcaaataaatttgaggaa atgattacctattttgaaaaagcactagtatatatgcacaaaatgcctaatatctggttg atgtatgctgaatattgcgcatcattgtagaaatatacacaaactagaaatgtgtatgat cgagccctttaatcattaccagtcactcaacatcatagaatttggaaagcttattgttaa tggatatcgaaaacagaatcaataacgactgcaatttctatatataatagatatattaag ataaatccagattataaagaagaatatttagattacttagtatcaaagcaattgtgggga aaggcatgctaaattttagtagatatcttaaatgatgatcaatttaattctgcaagtgga aaaaccaaatatgactttatgaaatatttatgcgaaatcattgctagacatcctaatgat ttaccaattgatgcagcatcaataatgaaatttggaattaagaaatattcagatgagatt ggataattatggataaaattagctgactattacataaaaacaggttaatttgaataagct agagatacatttgaagatgcagtcaataatgtgttaacagttaaagattttagtttggtt tttaatgcatatgtcaaatatgaagaaacaattatctaaatgctggaagattttgatgag aatgatgaaaatcaggatgatattgatgatacaatattatcaactaaattggattaatta ctaaaaataaagtcatcataagatgatgaagtctaaatagaagatgagttattattaaaa atggacagattggatgaacttttggaaagaagacccatacttttgaattcatgtatattg agataaaacaaatataatgttgaggaatggttaaaaagaattgtattagtcaaaggagat gaaagaatggctttgaaaaccttcactgaagcacttgaaattgttgaacctaatctagca gataatggaaagttgagtgatatttggatagcttatgctaaatattatagagataagggt gattggaaaacttgcaattaaatcttccataagggatcaaaaatagaattcaaaaatatt gaagaacatgtcaatctatggtcataatgggttgaaacattacttatagatggatttgtg aatgattctcttactgtaattaagtaagggttatttaaaaagtatgtaaagaaattagat aaaatgactccatcagaaatggtgccctattcattacaattatggcaactctatctagat ttagagaggaactttggaaattttaaatcattgcgtgcagcttataaacgcatggtcgaa ttaaaagttgtgactccttttattatcattaattatgctcaacttttggaagataatgca ttctatgaggagtcctttaaggtttttgaggctggagtctaattattcgattggccagct ttgtatgacttatggattgtttacataactaaatttatttaaaggtataggggtcaaaaa atagaaagaactagaaacctctttgaaactgttatcgaataagtgccaaaagataaaaat cgaatattttatttaatgtatggagaatttgaggaacaatatggattattaaatcatgct attgaaatttatgatagaatggtatttaatgttgaataccaggataaaatggaagcttat aatatttatatagccaaggtagcattatatttgggtattacgaaaactagacctgtattt gagagtgcaattgaaaatttataagaggcagaattaattcaaatgggattaagattagct taattggagagaaaatttggggaaatagacagagcaagagcagtctatatacatatttct taattcagtgatccaagattcgatgattttggattatggaaaacttgggagaattttgaa ttgcatcatggaaatgaagatacttataaagaattcagaagaatatcaaaaagtgtggtg gccaaattcagtttaatgcctccggatccaaaaaagattaaagagagagtagagaaggga taattagggtaagtatga

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