Paramecium tetraurelia: GSPATT00020489001
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Entry
GSPATT00020489001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptm04131
]
GSPATT00020489001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptm04147
]
GSPATT00020489001
Membrane trafficking [BR:
ptm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
GSPATT00020489001
Exosome [BR:
ptm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GSPATT00020489001
Exosomal proteins of bladder cancer cells
GSPATT00020489001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
COPI_C
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
B-prop_COPA_B_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
TPR_COPA_B
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
TPR_ZFYVE26
Beta-prop_DCAF4
NPB13-l_MII_rpt
DUF7952
Motif
Other DBs
NCBI-GeneID:
5040009
NCBI-ProteinID:
XP_001454224
Genoscope:
GSPATT00020489001
UniProt:
A0DUW0
LinkDB
All DBs
Position
undetermined
AA seq
1150 aa
AA seq
DB search
MFVKFERHSDRVKSVSFHPHRPWVLSALHSGIIELIDYRIKKRIATYDDHKGAVRSVQFH
PQLNLFCSGGDDFTVRVWNFKQCQFILKGHLDYVRCVTFHPINPWVLSGSDDQTARVWNY
QSRQTIGILTGHTHYIMACHFHPTQDFIITCSLDQTARLWNYGVLKQRYAQKKNQEYVLS
GAEVQLISILDAHKDQLNWCAFHQTEPFVITSADDKNIKLWKYNDTKAWEYDTLSGHTNN
VCCSEFHPKGNVIISDSEDHTVRIWDFATRKQIGVYENKYFDRYWIVSCHQNNYYFACGS
DTMLQVFTLHKDRVPLVLVNDRYLCIAEQKTLKVVELISGQQQIIRDIATVITPTPTLLE
DNIEFIEYNTYDTQKTQLMIRCIRSFKEPSKPKRHLLIVFQQQKGDSGVKQFFANCACFI
GKNKIARINQDQQVESYNYETDAVQLIDDKPASKVFHAPGGKILIQRIGTTPQLELFDPM
TKQVLHSVDYLNAKYVLYVESYLIVSTKLFLSIFSKQLQKLIEIKEQINIKSFIWFNNII
IYTTKSQIKYFLLNGDTGVLKSTENILYLAKAEEQQQNKLKLIAFDNTGKYISEILDISE
PLFKIAIMNKDLNSIHKFIENNQNEAMLSYLYQKKLASMALKLVKDKHAKFSLSLDCGNL
EYAYKVAQVIKDPQYFEQLRTEALRQGNHLLVDVCDQQLSQFDRLFFLCLCTGNTEKQEK
LQNISPNFIYESQKYKKIAIKNSLPKLSQIMDHIDGTPQKLDDGQKETIEWIKSLGGSQA
LVPPIPIMKFKSDPWPLVQLNEQDIINLEVTNETVVQQDIFTLQKQVIEEPQIDEQVNDG
QWGLDEEPEELIIESKAKDPVNKNIDEEALRGRYVNQKGDVAIKYIVAGDYETGIKLLNQ
QINLNNNQQFLKLLVDLPNFQLVNSTPYLALATLPVKINRFNEIKNLIKLGYKYTTDAKF
NEVSTCFQSVLQKILLTDFEENQIEDIKRYISICRSYLLAMRCDSLKKESNALEMACKMA
TIDLQPGHRILTLRQALSISYKQKNFITCQQIAKKLIELLKSDNTQKPEVLQNAQKYEKA
SQQQNSNAVQIEFQEQWLNQQPMYSANTLKNISTFKSCPYDGSVYETDYQQTCLICGLCR
VGNAPGLKYQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtaaaatttgagagacattcagatcgtgtcaaaagtgtttcctttcaccctcat
cgtccctgggttttgagtgcacttcactctggaatcatagaattgatcgattatcgaatt
aagaaaagaatagctacttacgatgatcataagggtgctgttcgatcagtctaatttcat
ccacaactcaacttattttgttcaggaggagatgattttacagttcgagtttggaatttt
aaataatgccaattcatattaaaaggacacttggattatgtgagatgcgtgacattccat
ccaataaatccttgggtgttatcaggttccgatgatcaaacagcaagagtgtggaattat
taaagcagataaaccatcggaattttaacaggacacacgcattatatcatggcttgtcat
tttcatcctacttaagatttcattatcacatgttcattagattaaactgcaagactatgg
aattacggagtccttaaatagagatatgcccaaaaaaagaattaagaatatgtgctatca
ggagctgaagtgcaattaatttcaattttggatgctcacaaagatcaacttaattggtgt
gcctttcattaaacagaaccttttgttatcactagtgctgatgacaaaaacatcaaatta
tggaagtacaatgacactaaggcatgggaatatgacactttatcaggtcatacgaacaat
gtttgttgttcggaattccatccaaaaggcaatgttatcatatcagattctgaagatcac
actgtgagaatatgggattttgctactcgtaaacaaattggagtctatgagaacaaatac
ttcgatcgatattggatagtatcatgtcatcaaaacaattactactttgcatgtggctca
gacacaatgttgtaagtgtttactctacataaagatcgagtgcctcttgttctggttaat
gacagatatctctgtatagctgaatagaaaacactgaaggtagtcgaattgatcagtgga
caatagcaaatcatcagagacattgccactgttattactcctactcctactctcttggaa
gataatattgaatttattgaatacaatacctacgacactcaaaaaacataattaatgata
agatgcatcaggtcattcaaggaaccgtcgaaacccaaaagacatttgctaatcgtattt
tagtaataaaagggagattcaggagtcaagcaattctttgctaattgtgcatgttttata
ggaaagaataaaattgctagaatcaatcaagattaataggttgaatcatacaattatgaa
acagatgctgtccaattaattgatgataaacctgcatctaaagtattccatgctcctggt
ggcaaaatattaattcaaagaattggaactacgcctcaattagaactatttgatcccatg
accaaataagtattacactcagttgactacttaaatgctaaatatgtcttatatgtggaa
tcctacctgattgtatcgaccaaattgtttctatctatcttttcaaaacaattacaaaaa
cttattgaaattaaggaataaatcaacatcaaatccttcatttggtttaacaatataata
atctatacaacaaaaagtcaaattaagtattttttattgaatggagacactggagtccta
aaatcaactgaaaatattctatacttggctaaggctgaagaataatagcaaaacaaactc
aagttgattgcatttgataacacaggcaaatatatttcagaaattcttgatatttcagaa
cctttgtttaaaatagcaattatgaacaaggatttgaattccatacacaagtttattgag
aataatcaaaatgaagctatgctgtcatacttgtattaaaaaaaacttgcttctatggcc
ttaaaattagttaaagataaacatgctaaattttcactttcccttgattgtggcaatttg
gaatatgcatataaagttgcacaagtaattaaagatccacaatattttgaataactaaga
actgaagctttaagacaaggtaatcatttgttagtggatgtttgtgatcaataactaagt
tagtttgatagattgttttttttatgtttatgcactggcaacactgagaagcaagagaaa
ttacaaaacataagccccaattttatctatgaatcctaaaaatacaagaaaattgcaatt
aagaactctttgcccaaattatcacaaatcatggatcacatcgatggaactccccaaaaa
ttagatgatggttaaaaggaaacaatagaatggattaaatccttaggaggtagctaagct
ttggttcctccaattcccattatgaaattcaagagtgatccatggccacttgtctaattg
aatgaataagacattatcaatcttgaagtgaccaatgaaactgttgtacaataagatatt
ttcacattataaaaataagtgatagaagagccttaaattgatgagtaagttaatgatgga
taatggggtttagatgaggagccagaagaactgatcatagaatctaaagctaaagatcct
gttaataagaacattgatgaggaagcattaagaggaagatatgtcaattaaaaaggagac
gtggccattaaatacattgttgctggagattatgaaacaggtatcaaattacttaaccaa
taaatcaatcttaataacaattaacaatttttaaaattgctagtcgatttacctaatttt
tagcttgtgaattcaacaccatatctcgctttggcaactttgccagtgaaaatcaataga
tttaatgaaatcaagaatctgattaaattaggttacaaatatacaacagatgccaaattt
aatgaagtaagcacctgcttctaatcagtactataaaaaatcctattaacagattttgaa
gagaatcaaatcgaagacataaaacgatacattagcatctgtagaagttatttactagct
atgagatgtgactcgcttaaaaaggagagtaatgccttagaaatggcttgcaaaatggca
acaattgatttatagcctggtcacagaatattgacactaagacaagctttgagcatcagt
tacaaataaaagaattttattacttgctaataaatagctaagaaattgattgagttacta
aaaagtgacaacactcagaaacctgaggtgttacaaaatgcatagaagtatgaaaaagca
tctcaacaataaaattcaaatgcggtttagatagagttttaagaataatggttgaatcaa
taaccaatgtactcagcaaacacgcttaaaaacatttcaacattcaaatcttgtccatat
gatggaagtgtttatgaaactgattactaacagacatgtttgatttgtgggttatgtcga
gttggtaatgcacctggacttaagtattaatga
DBGET
integrated database retrieval system
