Paramecium tetraurelia: GSPATT00020523001
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Entry
GSPATT00020523001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ptm
Paramecium tetraurelia
Pathway
ptm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GSPATT00020523001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptm04131
]
GSPATT00020523001
Membrane trafficking [BR:
ptm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GSPATT00020523001
Hops complex
GSPATT00020523001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
zf-RING_2
MurD_N
zf-C3HC4
zf-RING_Vps41
zf-C3HC4_2
zf-RING_5
zf_RING_Vps8_fungal
zf-rbx1
zf_RING_Vps8
zf-RING_11
Prok-RING_1
zf-ANAPC11
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
5040043
NCBI-ProteinID:
XP_001454258
Genoscope:
GSPATT00020523001
UniProt:
A0DUZ4
LinkDB
All DBs
Position
undetermined
AA seq
1061 aa
AA seq
DB search
MTDQISLFDENDEDLVADYGFESQEQEEKNTFQLKPFQIADFPLDQNLISFAINDHCIVF
TTDRKKIYRWRFLNEDGCVELPIKTEVEGDITDQIMKLSGQVGKQIGGAVLNTVSKVTKP
LFNASTKRSKRMDSEEGKLDCIFLEPKGNHIIVTSNKGDVYHACKDEEEVRLLEGVENYS
IRFFLWGEGSLYSFQNSIIIASNNKIYTYSLNYNNDKLLHTEVLSKTILQIPEIEKIVDV
KKVVKNTIHMILIVTDKHIYILNGTKDLRKLFQKYQEAPDLFLKSRIALKDKSYIPRIFI
ENSAILWTNGNNILLSNYSMLIENQTFQNSKKLKNYKRNSTEEVKLEQLYGLGLTKYHYY
LLTFDTLTVINLLSMSVVAYFDININSSGKALGMLYDQGTECFWVWCTNGIFRISVEFED
KDAWEQLLELKSYEEALLVNKKYDSPFYGQISGKYADILFSQALQLDPFKTPNNENIQND
ISDNTFMRSRHNRSNMRESLFDDKIEKVQISTEIVDMKFELYRKAALYYFGSNRSYEQVI
LQYEMGEINYNRDGLIENYLKPMVELLDKELKQIVFKKILELLMLSITNQGTIKAFLEQY
KTDLEVDSVIPTLKVHGLTYLETYFIELKQDHKTVVQNLLIQEDYRSVQEKLSSLNDNDL
LINLVYKYSYVIMKYNTQQTLDLFKKIDALDAQKMLSILLDVPSKSKELAIQFMQYCIFV
KSRKITDINFNNLYLQYLADLGKVEQIMYYINEQINQNENGEKIKFDLNYASQLFVKTNL
LQPYVYILQMLGDFENAIKKAIEIDLIEDAKNIALKCEDNNKQRQLWILQIRLMLEKGGK
YVKQIVQLTREIPLIKAEDILPYLTQNIKLDDFKDEICETLEEYHDQVEKQQNELEGYIK
SNENLKKLLLQTSNRYIFVSQKTKCENCFRKLFQEDYIVFECSHGFHRECILQYVKSNPT
VLDQKTYQSMLYLEKQLNDIEKLQIQTNQSKPDESIFGFFTASNQITLNNQRNARNEQQK
KFQSELNDILYKDCPVCGNFIFDQILLPLDNDEYTEETWFI
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacagattaaatttctctattcgatgaaaatgatgaagacttggttgcggattacgga
ttcgagtctcaagaataggaagaaaagaatacattctaactcaagccattccaaattgcc
gatttccctcttgattagaatctgatctcatttgcaatcaatgatcattgcattgtcttc
acaactgacaggaaaaagatatatcgatggagattcctaaacgaagatggatgtgttgaa
ttgccaatcaaaactgaagttgaaggagacattacagatcagattatgaaattgagtgga
caagtaggtaaacaaataggaggggctgttctcaatacagtttccaaagttaccaaacct
ctcttcaatgcatcaacgaaacgctcgaaaaggatggattctgaagaaggcaaattggat
tgcatattcttggaacctaaaggaaatcacatcattgtgacctcaaataaaggggatgtc
tatcacgcttgcaaagatgaagaagaagttcgacttttagaaggagttgaaaattacagc
attcgttttttcttgtggggagaaggctcactttactcattccaaaattctattattata
gcatccaacaataaaatctatacctactcacttaattataataatgataaacttttgcac
actgaagtcttgagcaaaaccatcctataaatacctgaaatcgaaaaaattgtagatgtt
aaaaaagtcgtgaagaacactattcatatgattttgattgtcacagataagcacatctat
attttgaatggcacaaaagatctcaggaaactcttttaaaaatatcaagaagcccctgat
ctatttctgaaatctagaattgcactcaaagacaaatcctacatcccaagaatctttata
gagaactctgccattttatggactaatggcaataatatactgctgtctaactattctatg
ctaatcgaaaatcaaaccttttagaattccaaaaaacttaaaaattataaacgaaattca
acagaagaggttaaattagagtaactctatgggttaggactcactaaatatcattactat
ctattaacctttgacaccctgactgttatcaacttactatctatgtccgttgtggcatac
ttcgatattaatatcaactcctcaggcaaggctttaggaatgttatatgattagggaact
gaatgcttttgggtgtggtgcaccaatggcatctttagaattagcgttgaattcgaagac
aaggatgcttgggaacaattgctagaactcaaatcctatgaagaagccttgcttgtaaat
aaaaaatatgattcccccttttatggtcagatatcaggcaaatatgcagacatacttttc
agccaagccttacagctagatccattcaagactccgaataatgaaaatattcaaaatgat
atttctgataacacttttatgagaagcagacataacagaagcaacatgagagaaagtcta
ttcgatgacaaaattgagaaggttcaaatttcaacggagattgttgatatgaaattcgaa
ttatatcgaaaagctgccctctattactttggtagcaatagatcttatgaataagtcatt
ttacaatatgaaatgggagaaatcaattacaatagggatggtctgatagaaaactatctt
aaacctatggttgaactactggataaagaattaaagtaaattgtattcaaaaagattttg
gaacttctcatgctctcaatcacaaattaaggaacgatcaaagcctttctggaataatat
aaaactgacttggaagtagattcagtcatacctacattgaaagtccatggattaacttac
ttagaaacttatttcatcgaattgaaataggatcataaaacagttgtttaaaacctattg
atttaagaagattatagatctgtctaagagaaactatcatctttaaatgataatgattta
ctaattaatctagtctataaatactcctatgttatcatgaaatacaatacataataaacc
ttagatttatttaagaaaatcgatgccttggatgcacaaaaaatgctttcaattttgctg
gatgttccttccaaaagcaaagaattagccattcaatttatgcaatattgtatctttgtg
aagtctcgcaagatcacagatataaattttaacaacctttatcttcaatatctggcagat
cttgggaaggttgagcaaattatgtattacattaatgaacaaattaactaaaacgaaaac
ggagaaaagattaaatttgatttgaattatgcatcttagttgttcgtgaagactaattta
ttgtagccatatgtttatatactgcaaatgttaggcgattttgaaaatgccatcaaaaag
gccattgaaatagatcttattgaggatgctaagaatattgcattaaaatgtgaagacaat
aacaaataaagataattgtggattctataaattagattgatgttggagaaaggtggcaaa
tacgttaaatagatagttcaattaactagagaaattcccctaattaaggcagaagatatt
ctaccttatttgacttagaatattaaattagacgatttcaaagacgaaatctgtgaaact
ttggaggaatatcatgattaagttgaaaaacagcaaaatgagcttgaaggatacatcaaa
tcaaatgaaaatttaaaaaagctattgctacaaactagtaataggtacatttttgtatcc
tagaaaactaaatgcgaaaattgctttagaaaacttttccaagaggattatattgttttt
gagtgttcacatggttttcatagggaatgcattcttcaatatgttaaaagtaatccaact
gtattggattaaaagacttatcaaagtatgctctatttagaaaaatagttaaatgacatt
gaaaaactgtaaatacaaacaaactaaagtaagcctgatgaatcgatttttggatttttc
actgcttcgaattaaattactttaaataattaaagaaatgctagaaatgaataataaaag
aaatttcaatcagaacttaatgatattttatataaggattgtcctgtgtgtggcaatttt
atatttgattaaattttattgccattagacaatgatgagtatactgaggagacttggttt
atatga
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