KEGG   Paramecium tetraurelia: GSPATT00020690001
Entry
GSPATT00020690001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptm04121]
    GSPATT00020690001
Enzymes [BR:ptm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     GSPATT00020690001
Ubiquitin system [BR:ptm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    GSPATT00020690001
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-ANAPC11 zf-RING_5 TMEM125 RINGv zf-C3HC4_3 zf-RING_16 zf_RING_Vps8 zf_RING_Vps8_fungal DUF4381 zf-RING_Vps41
Other DBs
NCBI-GeneID: 5040222
NCBI-ProteinID: XP_001454434
Genoscope: GSPATT00020690001
UniProt: A0DVH0
LinkDB
Position
undetermined
AA seq 258 aa
MDDQTLLERLIETEEQCKKIKSSLNSIQLYLNIQLIIVISYISLPWYYEYQKASIFYLIC
RLLQYSFHLFSVIQIKQTVEIISESSRQFIESLNDQIDVWAAVKGNHGTLSKCNQFVYII
MFGLGNVVLLQNTLLLSKWILVVQLIFGWVVLATIVLGLFAICLILPFLLYRVYRQRLEE
ERRRQEQALRLIGTQFKYSELNGQTFQPCYICLQNYDQDDLIVKLSCNPNHIFHSDCIRP
WAEINDTCPVCRQRLSQQ
NT seq 777 nt   +upstreamnt  +downstreamnt
atggatgattaaactcttttagaaaggctaatagagacagaagaatagtgtaaaaagatc
aaaagctcactaaattctatataattgtacttaaatatataattaataattgtcataagt
tatatttcattaccttggtattatgaatattaaaaggcatcaattttttatttgatttgt
agattattgcaatattcatttcacctctttagtgtaatctaaataaaataaactgttgaa
ataatttctgaaagttcaagataatttatagaatcattgaatgattaaattgatgtttgg
gcagcagtaaagggaaatcatggaacgctaagcaaatgcaattaatttgtttatataata
atgttcggcttagggaatgtggtgttgttgcaaaatactctattgctcagtaaatggatt
ttagttgttcaattgatatttggatgggttgtactagctacaatagttcttggcttattt
gcaatatgtttgattttgccctttttactatatcgagtctatcgctaaagattagaagaa
gaaagaagaagataagagcaagcacttcggttgattggaacttaattcaaatactcagaa
ttaaatggtcaaacattttaaccttgctatatttgtttataaaattatgattaagatgat
ctgatagtcaaattatcttgtaatccaaatcatatatttcattcagactgtattcggcca
tgggctgaaataaatgatacatgtcctgtttgtagataaagattatcataataatga

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