KEGG   Paramecium tetraurelia: GSPATT00021102001
Entry
GSPATT00021102001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00021102001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00021102001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GSPATT00021102001
 Complex B
    GSPATT00021102001
 Complex C
   U2 SnRNP specific factors
    GSPATT00021102001
SSDB
Motif
Pfam: RRM_1 RRM_5 DUF4523 DUF4108
Other DBs
NCBI-GeneID: 5040641
NCBI-ProteinID: XP_001454856
Genoscope: GSPATT00021102001
UniProt: A0DWP2
LinkDB
Position
undetermined
AA seq 228 aa
MNQPYLHPAQQINQDSAPKETLYVTGLNDKIKLEDLKFVLYILFSQFGEVLQIVMKKTQK
LRGQAFIVFQNITYATNAKSALTGMMVYDKPLIIEFAYKKSVIFDRMEGKFYYKQKQQKE
LQPTLPTELVKEKKQKKLEDKLNNNPVFNQGEVNNVLLIESLPPFVTEIMLSELFRQYPG
YSLIKLISARGLAFVEYQNDDQATVALKGLNNFKVTPECQLKVKYAKK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaattaaccttatcttcatccggcacaacaaattaattaggactctgctcccaaagaa
accctttatgtcactggattaaatgataaaatcaaattggaagacttaaaatttgtgtta
tacattctcttctctcaatttggagaagtcttatagattgtaatgaaaaaaacataaaaa
ttaagaggtcaagcctttattgtattttaaaatattacttatgccaccaatgccaaatca
gccttgactggaatgatggtctatgacaaaccactaattattgaatttgcatacaagaag
agtgttatttttgataggatggaaggcaaattttattacaaatagaaacaacaaaaggaa
ttacaaccaaccttgccaacagagttggtaaaggagaagaaataaaaaaaattagaagat
aaattaaataacaatcctgttttcaattaaggagaagttaataatgtgttattgatagaa
tcattacccccatttgtcaccgaaattatgttatcagagttatttagacaatatcctggt
tattctttaatcaaattaataagtgcaagaggcttggcctttgttgaatattaaaatgat
gaccaagctactgtagcattgaaaggtctgaacaattttaaagtaactccagaatgttaa
ctcaaagtaaaatatgcaaaaaaatga

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