KEGG   Paramecium tetraurelia: GSPATT00022197001
Entry
GSPATT00022197001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00022197001
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GSPATT00022197001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ptm01009]
    GSPATT00022197001
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00022197001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00022197001
Protein phosphatases and associated proteins [BR:ptm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     GSPATT00022197001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     GSPATT00022197001
    SWI/SNF complex
     GSPATT00022197001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    GSPATT00022197001
   PBAF complex
    GSPATT00022197001
   SWI/SNF complex
    GSPATT00022197001
SSDB
Motif
Pfam: SNF5 HTH_3 HTH_26 CENP-B_N Phage_CI_repr HTH_37
Other DBs
NCBI-GeneID: 5042210
NCBI-ProteinID: XP_001456425
Genoscope: GSPATT00022197001
UniProt: A0E161
LinkDB
Position
undetermined
AA seq 386 aa
MQIQKDLKSRIQEILQKHNIKQVDLAREIGIHHSTLSLWMQNKNKPRKQDISNSQSTRIE
ELLERWIATFHANKGQGMGTGQFRLPDSRASQFMSHHTVRPVLPISKFHILRNQYQNSIK
QQRQEIILRKTQEQLKNNPNISLQQALNQSAQDIPIEPPKHQQLVPITIDFELDGKKIYQ
TFCWNLNESHMIPETFARIITEENQLPSVIEQEICTQIKKQVQDYKCYYPTKDEMLKNLH
VDLRVENIHFNDQLEWDMNNTMNSPEALAELTAKEMGMPEQYEPRIAHALRESISSLQRQ
MEPKTGEDFSNLKKSTRTLIESNANFNQFKNVMFSNQINFKNWVRCELEYDHQFEWGPSI
ELLDQNALRNVQKQEDRKTRYVRRQR
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgtaaatacaaaaagatctcaaatcgagaatacaagaaatactccaaaaacacaatatt
aaataagtcgatttggcaagagaaataggcatccatcacagtactctttccctctggatg
cagaacaaaaacaaaccaagaaaacaagacatttccaattcccagagtacaagaatcgaa
gagttattggaaagatggatagccaccttccatgccaataaaggctaaggaatgggcact
ggctaattccgactccctgatagcagagcctctcaattcatgtcccatcatactgtcagg
cctgtattgcccatttccaaattccacatccttagaaatcaatatcaaaattccatcaaa
taataaagacaagaaatcattttgcgtaagacttaggagcaattgaaaaacaatcccaat
atttcattacaataagcattaaatcaatctgcttaagacattcccattgaaccgcccaaa
catcaataattagttccgatcaccattgattttgaattagatggcaagaaaatttactaa
actttttgttggaatctaaatgaatctcatatgatcccagaaacatttgccagaataatc
acagaagagaatcaattgccttcagttattgaataggaaatctgtacacaaatcaagaaa
caagtttaagattataaatgctactacccaacaaaagatgaaatgttaaagaatctccat
gtagatctgagagttgaaaacattcatttcaatgattagttggaatgggatatgaacaat
accatgaattcaccagaagcattagcagaattgacagccaaagaaatgggaatgcctgaa
taatatgagcctagaatagcacatgctctaagagaatcaatctcatctttacaaagacaa
atggaacccaaaactggcgaagactttagtaatttaaagaagagcactagaactttgatt
gaaagcaatgccaatttcaatcaatttaaaaatgtcatgttttctaattaaatcaacttt
aagaattgggtcagatgtgaattagaatatgaccatcaatttgaatggggtccttcgatt
gaacttcttgattagaatgctctaaggaatgtgtaaaagtaggaggatcgtaaaaccagg
tatgtaaggagataaagatga

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