Paramecium tetraurelia: GSPATT00022197001
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Entry
GSPATT00022197001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03082
ATP-dependent chromatin remodeling
ptm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSPATT00022197001
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSPATT00022197001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptm01009
]
GSPATT00022197001
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptm03021
]
GSPATT00022197001
03036 Chromosome and associated proteins [BR:
ptm03036
]
GSPATT00022197001
Protein phosphatases and associated proteins [BR:
ptm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSPATT00022197001
Transcription machinery [BR:
ptm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GSPATT00022197001
SWI/SNF complex
GSPATT00022197001
Chromosome and associated proteins [BR:
ptm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GSPATT00022197001
PBAF complex
GSPATT00022197001
SWI/SNF complex
GSPATT00022197001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
HTH_3
HTH_26
CENP-B_N
Phage_CI_repr
HTH_37
Motif
Other DBs
NCBI-GeneID:
5042210
NCBI-ProteinID:
XP_001456425
Genoscope:
GSPATT00022197001
UniProt:
A0E161
LinkDB
All DBs
Position
undetermined
AA seq
386 aa
AA seq
DB search
MQIQKDLKSRIQEILQKHNIKQVDLAREIGIHHSTLSLWMQNKNKPRKQDISNSQSTRIE
ELLERWIATFHANKGQGMGTGQFRLPDSRASQFMSHHTVRPVLPISKFHILRNQYQNSIK
QQRQEIILRKTQEQLKNNPNISLQQALNQSAQDIPIEPPKHQQLVPITIDFELDGKKIYQ
TFCWNLNESHMIPETFARIITEENQLPSVIEQEICTQIKKQVQDYKCYYPTKDEMLKNLH
VDLRVENIHFNDQLEWDMNNTMNSPEALAELTAKEMGMPEQYEPRIAHALRESISSLQRQ
MEPKTGEDFSNLKKSTRTLIESNANFNQFKNVMFSNQINFKNWVRCELEYDHQFEWGPSI
ELLDQNALRNVQKQEDRKTRYVRRQR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtaaatacaaaaagatctcaaatcgagaatacaagaaatactccaaaaacacaatatt
aaataagtcgatttggcaagagaaataggcatccatcacagtactctttccctctggatg
cagaacaaaaacaaaccaagaaaacaagacatttccaattcccagagtacaagaatcgaa
gagttattggaaagatggatagccaccttccatgccaataaaggctaaggaatgggcact
ggctaattccgactccctgatagcagagcctctcaattcatgtcccatcatactgtcagg
cctgtattgcccatttccaaattccacatccttagaaatcaatatcaaaattccatcaaa
taataaagacaagaaatcattttgcgtaagacttaggagcaattgaaaaacaatcccaat
atttcattacaataagcattaaatcaatctgcttaagacattcccattgaaccgcccaaa
catcaataattagttccgatcaccattgattttgaattagatggcaagaaaatttactaa
actttttgttggaatctaaatgaatctcatatgatcccagaaacatttgccagaataatc
acagaagagaatcaattgccttcagttattgaataggaaatctgtacacaaatcaagaaa
caagtttaagattataaatgctactacccaacaaaagatgaaatgttaaagaatctccat
gtagatctgagagttgaaaacattcatttcaatgattagttggaatgggatatgaacaat
accatgaattcaccagaagcattagcagaattgacagccaaagaaatgggaatgcctgaa
taatatgagcctagaatagcacatgctctaagagaatcaatctcatctttacaaagacaa
atggaacccaaaactggcgaagactttagtaatttaaagaagagcactagaactttgatt
gaaagcaatgccaatttcaatcaatttaaaaatgtcatgttttctaattaaatcaacttt
aagaattgggtcagatgtgaattagaatatgaccatcaatttgaatggggtccttcgatt
gaacttcttgattagaatgctctaaggaatgtgtaaaagtaggaggatcgtaaaaccagg
tatgtaaggagataaagatga
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integrated database retrieval system