KEGG   Paramecium tetraurelia: GSPATT00025229001
Entry
GSPATT00025229001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K10740  replication factor A3
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03030  DNA replication
ptm03420  Nucleotide excision repair
ptm03430  Mismatch repair
ptm03440  Homologous recombination
ptm03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSPATT00025229001
   03420 Nucleotide excision repair
    GSPATT00025229001
   03430 Mismatch repair
    GSPATT00025229001
   03440 Homologous recombination
    GSPATT00025229001
   03460 Fanconi anemia pathway
    GSPATT00025229001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptm03032]
    GSPATT00025229001
   03400 DNA repair and recombination proteins [BR:ptm03400]
    GSPATT00025229001
DNA replication proteins [BR:ptm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    GSPATT00025229001
DNA repair and recombination proteins [BR:ptm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     GSPATT00025229001
   MMR (mismatch excision repair)
     GSPATT00025229001
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     GSPATT00025229001
SSDB
Motif
Pfam: Rep_fac-A_3 Phage_tube
Other DBs
NCBI-GeneID: 5045677
NCBI-ProteinID: XP_001459892
Genoscope: GSPATT00025229001
UniProt: A0EB28
LinkDB
Position
undetermined
AA seq 110 aa
MTDIPTSYQRINADMIIKFKGQYVTLVGKLLQSKGDYVEFMVDGSIVKVTEIEEVPESNE
DILLEIRGKLNDDGFLEAKEFTELDQTFDFELYKKAINMVQGQFRELFYD
NT seq 333 nt   +upstreamnt  +downstreamnt
atgacagatatcccaactagttatcaaagaataaatgcagacatgataatcaaattcaaa
gggcaatatgtaacacttgttggaaaattattgtaaagcaaaggagattatgttgaattt
atggtggatggatcaattgtgaaagtgactgagattgaagaagttcctgaaagcaatgaa
gatatccttttagaaataagaggcaaattaaatgatgatgggtttttagaagctaaagaa
ttcacagaattagattaaacatttgatttcgagctctataaaaaagccataaatatggtt
caaggacaatttagagaattgttttatgactga

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