KEGG   Paramecium tetraurelia: GSPATT00025934001
Entry
GSPATT00025934001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00025934001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00025934001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00025934001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GSPATT00025934001
 Complex B
    GSPATT00025934001
 Complex C
   U2 SnRNP specific factors
    GSPATT00025934001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    GSPATT00025934001
SSDB
Motif
Pfam: SF3b1 TOR1L1_N HEAT_EF3_N HEAT_2 DUF2298
Other DBs
NCBI-GeneID: 5046772
NCBI-ProteinID: XP_001460987
Genoscope: GSPATT00025934001
UniProt: A0EE73
LinkDB
Position
undetermined
AA seq 643 aa
MTEEQGKQRFAYTAPKQILEEAAQIGEDNQTRKQNLDKVEEKFKYKQKNRQLSPERKDVF
NDQGGENGRTYAEIMIQQDLENSRSEIENKIKKTETLNKEEKKLVKQQVKVEQNVAQQIK
QERSEWEQESKDVSKKPQKWETPSRDGPQSSARASRWDNTNKLQATPGRAGTVFGETPTP
GHMEIGDTPYKYGETPTPNRSYIKARWGERTPLAGQSGFGGGMTPHTPGTVNRTPMTPGQ
LGNMTPDRVYQFRLEKEMEERNKYMTDEELTSILPGPKDGYEILKAPENYKPLKSSLKKL
LNAKNSIESPVQYQIPESIRIEVSATPSHPTIGQLPAIKPEEYNLFSALLQPINEDELTP
EQAKERKIMALLLKIKNGTPQMRKSALRQITQSAREFGPAPLFNQILPLLMSPTLEDQER
HLLVKVIDRVLFKLDDLVRPYVHKILVVIQPLLIHEDYYARVEAREIISNLAKAAGLATM
ITTMRPDIDHNDDYVRNTTARAFAIVASALGIPALLPFLKAVCQSRKSWQARHTGIKIVQ
QISIFMGCAILPHLKSLVEIIQHGLKDEQQKVKTITALALAALAEAPFHMVLKHLIMCLF
LCGKASKLIRVKDQQHFQKRLDSSFHQWMQNMQQSMLKQSFLY
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgactgaagagcagggcaagcaacgatttgcgtatacggcaccaaaacaaattttagaa
gaagctgcacaaattggtgaagacaattaaacaagaaagtaaaatttagacaaagttgaa
gaaaagttcaagtacaagcaaaagaaccgctagttgagtccagaaagaaaagatgttttc
aatgattaaggaggtgagaatgggagaacatatgcagaaatcatgatctaataggacttg
gagaattccagatctgaaattgaaaataaaatcaaaaagaccgagacattaaataaggag
gaaaaaaaattagtcaaataataagtgaaggtggaataaaatgttgcttaataaattaaa
taggaaagatcagaatgggaataagaaagcaaagacgtttctaaaaagccttaaaaatgg
gaaaccccatccagagatggtccataatcgtcagcaagagcatccagatgggataacaca
aataaattataagctactccaggtagagcaggaacagtattcggagaaacaccaacacca
ggacatatggaaatcggagataccccatataaatatggagaaactcctactccaaatcgt
tcgtacataaaagccagatggggagaaagaacaccattggctggtcaatccggatttgga
ggaggcatgacacctcatacaccaggaactgtaaataggacacccatgactcctggataa
ttgggaaacatgactcctgatagagtatactagtttagattggaaaaagaaatggaagag
agaaataaatatatgacagatgaggaattaaccagcattttacctggtccaaaggatggt
tatgaaatattaaaagcacctgagaattataaaccattgaaatcatcattaaagaaatta
cttaatgcaaaaaatagtattgaatcaccagtgcaatattaaataccagaatctattcgt
attgaagtttcagctactccctctcatcctactataggtcaattaccagcaattaagcca
gaagagtataatttattctcagctttgttacaaccaatcaatgaggatgaattaactcca
gaataggcaaaagaaagaaagattatggccttgcttttgaaaataaagaacggaactcct
taaatgagaaagtcagctttaagataaattacttaaagtgccagggaatttggacctgct
ccattattcaattagatcttaccattgttaatgtctccaactttagaggatcaagagaga
catctattggtgaaagtaattgacagagtcctatttaaattggatgatttggttaggcca
tatgtacataagatattagttgttatctaaccactgttaattcatgaagattactatgct
agagttgaagctagagagatcatttccaatttagctaaggcagctggtttggcaactatg
attactaccatgagacctgatattgatcataatgatgattatgttcgtaatactactgct
agagcatttgctattgtggcttcggctttgggtattccagcattgttgccatttttaaag
gctgtctgttagagtagaaagagttggtaggcaagacatactggtattaaaatagttcaa
taaatcagtatctttatgggatgtgctattctgcctcatctgaaatcactagttgaaatt
atacaacatggattgaaagatgaataataaaaagtaaaaactattacagctttagcatta
gctgctttggcggaagctcctttccatatggtattgaagcatttgataatgtgcttattc
ctttgtgggaaggcatcaaaactcataagggtaaaggattagcagcatttttaaaagcga
ttggattcatcattccattaatggatgtagaacatgcaacagagtatgttaaagcaatcg
ttcctatattga

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