KEGG   Paramecium tetraurelia: GSPATT00026110001
Entry
GSPATT00026110001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSPATT00026110001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00026110001
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00026110001
Spliceosome [BR:ptm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GSPATT00026110001
 Complex B
    GSPATT00026110001
 Complex C
   U2 SnRNP specific factors
    GSPATT00026110001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    GSPATT00026110001
SSDB
Motif
Pfam: SF3b1 HEAT_EZ TOR1L1_N HEAT HEAT_EF3_N ParcG CEP104-like_TOG DUF1428 DUF2298
Other DBs
NCBI-GeneID: 5046946
NCBI-ProteinID: XP_001461161
Genoscope: GSPATT00026110001
UniProt: A0EEP7
LinkDB
Position
undetermined
AA seq 902 aa
MTEEQGKQRFAYTAPKQILEEAAQIGEDNQTRKQNLDKVEEKFKYKQKNRQLSPERKDVF
NDQGGENGRTYAEIMIQQDLENSRSEIENKIKKTETLNKEEKKLVKQQVKVEQNVAQQIK
QERSEWEQESKDVSKKPQKWETPSRDGPQSSARASRWDNTNKLQATPGRAGTVFGETPTP
GHMEIGDTPYKYGETPTPNHGEKEHLWLVNHGFGGGMTPHTPGTVMRTPMTPGQLGNMTP
DRVYQFRLEKEMEERNKYMTDEELTSILPGPKDGYEILRAPENYKPLRSSLKKLLNAKDS
IESPVQYQIPESIRIEVSATPSHPTIGQLPAIKPEEYNLFSALLQPINEDELTPEQAKER
KIMALLLKIKNGTPQMRKSALRQITQSAREFGPAPLFNQILPLLMSPTLEDQERHLLVKV
IDRVLFKLDDLVRPYVHKILVVIQPLLIHEDYYARVEAREIISNLAKAAGLATMITTMRP
DIDHNDDYVRNTTARAFAIVASALGIPALLPFLKAVCQSRKSWQARHTGIKIVQQISIFM
GCAILPHLKSLVEIIQHGLKDEQQKVKTITALALAALAEASFPYGIEAFDNVLIPLWEGI
KTHKGKGLAAFLKAIGFIIPLMDVEHATEYVKAIVPILKNQFEIQEEEMKKIVLMVIKQC
IQCAGIEAVYVRDQIMPEFFKYYWSKRTATDRRNYRQMVETTCEIAAKVGAAEILERIVG
DLKDENESFRKMVVETIEKFINQLGVSDIDSKLENRLMDGVLWAFNEQQSEDTQTMLSGF
GSIINAFGSRSKPYFSQLGGVLQWRLSNKSPRVRQQAADLIGKIAVCMKNCQEEARLGRL
GQLLFECLGEEYPEVLGSILGGLKAIVNVIGMNKMSPPIKDLLPRLTPILKNRHEKVQAE
LH
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgactgaagagcagggcaaataacgatttgcgtatacggcaccaaaacaaattttggaa
gaagctgcataaattggcgaggacaattaaacaagaaagtaaaatttagacaaagttgaa
gaaaagttcaagtacaagcaaaagaaccgctagttgagtccagaaagaaaagatgtgttc
aatgattaaggaggtgagaatgggagaacatacgcagaaatcatgatctaataggacttg
gagaattccagatctgaaattgaaaataaaattaaaaagacagagacattaaataaggag
gaaaaaaaattggtcaaacaacaagtgaaggtggaataaaatgttgcttaataaattaaa
taggaaagatcagaatgggaataagaaagcaaagatgtttctaaaaagccttaaaaatgg
gaaaccccatcaagagatggtccataatcatctgcaagagcatccagatgggataataca
aataaattataagctactccaggtcgagcaggaacagtatttggagaaacgcctactcct
ggacatatggaaattggagataccccatataaatacggagaaactcccactcctaaccat
ggggagaaagaacacctttggctggtcaatcatggatttggaggaggaatgacacctcat
acaccaggaactgtaatgaggacgccaatgactcctggataattaggaaacatgactcct
gatagagtatactagtttagattggaaaaagaaatggaagagagaaataaatatatgact
gatgaggaattaaccagcattttacctggtccaaaggatggttatgagatattaagagca
cctgagaattataaaccattgagatcatcattaaagaaattacttaatgcaaaagatagt
attgaatcaccagtgcaatattaaataccagaatctattcgtattgaagtttcagctact
ccctctcatcctactataggtcaattaccagcaattaagccagaagagtataatttattc
tcagctttgttacaaccaatcaatgaggatgaattaactccagaataggcaaaagagaga
aagattatggctttgcttttgaaaataaagaacggaactccttaaatgagaaagtcagct
ttaagataaattacttaaagtgccagggaatttggacctgctccattattcaattagatc
ttaccattgttaatgtctccaactttagaggatcaagagagacatctattggtgaaagta
attgacagagtcctatttaaattggatgatttggttaggccatatgtacataagatatta
gttgttatctaaccattgttaattcatgaagattactatgctagagttgaagctagagag
atcatttccaatttagctaaggcagctggtttggctactatgattactaccatgagacct
gatattgatcataatgatgattatgttcgtaacacaactgcaagagcatttgctattgtg
gcttcggctttgggtattccagcattgttgccatttttaaaggctgtctgttagagtaga
aagagttggtaggcaagacatactggtattaaaatagttcaataaatcagtatctttatg
ggatgtgctattctgcctcatctgaaatcactagttgaaattatacaacatggattaaaa
gatgaataataaaaagtaaaaactattacagctttagcattagctgctttggcggaagcc
tcctttccatatggtattgaagcatttgataatgtgcttattcctttgtgggagggcatc
aaaacacataagggtaaaggattagcagcatttttaaaagcgattggattcatcattcca
ttaatggatgtggaacatgcaacagagtatgttaaagcaatcgttcctatattgaaaaac
taatttgaaatataggaagaggaaatgaagaagattgtattaatggtaataaaataatgc
atataatgtgcaggtatagaggctgtttatgtaagagatcagataatgcctgaattcttc
aaatattattggagcaaaagaacagccacagacagaagaaattacagataaatggttgaa
accacctgtgaaatagctgctaaagtgggagcagctgaaatattagaaagaattgtagga
gatctcaaagatgaaaatgaatcatttagaaagatggttgtggaaactatagaaaagttt
ataaattaactaggagtatcagatatcgattcgaaattggaaaacagattgatggatgga
gtcttatgggcatttaatgaataacaaagtgaagatacctaaacaatgttgagtggattt
ggatctataattaatgcttttggcagtagatctaagccttatttcagttaattaggtggt
gttttataatggagattatctaataaatcacccagagttagataataagcagctgatttg
attggtaaaattgcagtttgcatgaagaattgctaagaagaagcaagattaggaagatta
ggctagttattatttgaatgtctaggtgaagaatatccagaagttctaggatctatctta
ggaggattgaaggctatagtcaatgtaataggaatgaataagatgtcccctcctattaaa
gatttattgccaagattgacacccatcttaaaaaatagacatgagaaggtttaagcagaa
ttgcattga

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