Paramecium tetraurelia: GSPATT00026562001
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Entry
GSPATT00026562001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03430
Mismatch repair
ptm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSPATT00026562001
03460 Fanconi anemia pathway
GSPATT00026562001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00026562001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GSPATT00026562001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
TFIIA
Glycos_transf_2
Exonuc_VII_L
CutC
Motif
Other DBs
NCBI-GeneID:
5047397
NCBI-ProteinID:
XP_001461612
Genoscope:
GSPATT00026562001
UniProt:
A0EFZ8
LinkDB
All DBs
Position
undetermined
AA seq
685 aa
AA seq
DB search
MIKQLNQESILHISTSSTLQSLASFVKELIENSIDAQATQIIVNFFNNGKEGFEVIDNGI
GISTINQKQLATRGGTSKIENFEDLEFVVTHGFRGEALNSIATLSNVTIISKHKDEELGW
KWEIPQEPTKIARQTGTSIRVENIFYTLPVRAQEFKKNYKIEYNKAINILTEYAIINTNI
EFKIYNEEEKNKKKLILDSGLANQNMKQRITNVLGDSIANDLIPFEKISQDFTLIGFLSK
SIESGSYKGQNRKTFWYCYINKKPINPPKQVLQIMRDIYRQHNPNGNFFFILEINLRQIN
DADFNVSVDKRDVYLKNEKLILENIEQIVTETLEKNKEKLKYIGRDGNLDQFIMATAKQS
EKPAPSQIIAQTEKRKDPPPQQTKEIQKRNSTFLSQLKNLNPQKNIPNEFNQNESQFTQS
QQDLQQQQQQQQQQQQQQQQQQQQPTSQPNNEKIQLKINEVIQQKEEKQLFEADEFEQLS
KQNHFLKEHFNNLQIIGQFNKGFIICEHEEKIYVLDQHACDEKYNYERLINQLKFNRAQL
IVPITLKLSGFLLELLIDNQQQINDKYKYQVEITENCVKVKTCPSYSNIQLGADTLLQIL
DQLSQGKKLDQIEIPQIKQKLASQACRTSIMVGSDLQAKQMENVVKNLTTLISPWNCPHG
RPTLIQVQQPKQAKFSKGFSNNLLY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaataattaaattaagagtctattttacatatatcaacatcttcaactctttag
agtttagcaagttttgtgaaggaattaatcgagaattctatagatgcacaggcaacataa
attattgtgaatttttttaataatggcaaagaaggttttgaagtaatagataatggaatt
ggaatctcaacaatcaattaaaaatagctagccactagaggaggtactagcaagatagaa
aattttgaggatttggaatttgtcgtcactcatggatttagaggggaagccttaaattca
atagcaacattatctaacgtaacaattatttccaagcataaagatgaagaattagggtgg
aaatgggaaataccccaagagccaactaagattgccagataaacaggaacatcaattaga
gtagaaaatatattttatacgcttcctgttagagcataagagtttaaaaagaattacaaa
atcgaatataataaagctatcaatatattgactgagtacgctatcattaatacaaatatt
gaatttaaaatatataatgaggaagaaaaaaataagaaaaagctcatcttagatagtgga
ttggcaaatcaaaatatgaaataaaggattacaaatgttttaggggattctattgccaac
gacttaatcccttttgagaagatctcataagactttaccttaattggctttttaagtaaa
agtattgaaagtgggagttataaaggttaaaatagaaaaacattttggtattgttacata
aataaaaaacctataaatcctcctaaacaagtattataaataatgagagatatctataga
taacataatccaaatggaaactttttttttatcctagaaataaatttacggcagattaat
gatgcagatttcaatgttagtgtagataaaagagatgtatatttgaaaaatgaaaaatta
attcttgaaaacatcgaataaatcgtgacagaaactttagaaaaaaataaagaaaaacta
aagtatattggaagagatggaaatttagattaatttatcatggcaactgcaaagtaatca
gaaaagccagctccttcacaaattattgcataaacagaaaaaagaaaagatcctccaccc
taataaactaaagaaatttaaaaaagaaatagtactttcttgtcctagcttaagaattta
aatccttaaaaaaatataccaaatgaatttaattaaaatgaatcataattcacataatca
caataagacttataataataataataataataataataataataataataataataataa
taataataatagccaacttcctaaccgaataatgagaaaatataattaaaaattaatgaa
gtgatttaataaaaagaagaaaaataattatttgaagctgatgaatttgaataactatca
aaataaaatcatttcctcaaagaacacttcaataatttataaattattggttaatttaat
aaaggatttattatttgtgagcatgaagagaaaatatatgttcttgattagcatgcttgt
gatgagaagtacaattatgagagattaatcaattaattaaaattcaacagagcctagtta
attgtaccaataactctcaaattatcaggatttctgttagaattactgatagataattaa
caataaattaatgataaatacaaatatcaagtggagataacagaaaattgtgttaaagtg
aaaacatgccccagttatagtaatattcaactaggggctgatactttactctaaattcta
gatcagttgagttaaggcaaaaaactagatcaaatagagatcccttaaataaaatagaaa
ttagcttcacaagcctgcagaacttcaataatggttggatcagatttataagcaaaacaa
atggaaaacgtagtaaaaaatttaacaactttaatttctccatggaattgtcctcatgga
aggccaacactgatttaagttcaacaaccaaaataagctaaatttagcaaaggatttagc
aataatttgttgtattga
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