Paramecium tetraurelia: GSPATT00027123001
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Entry
GSPATT00027123001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03030
DNA replication
ptm03410
Base excision repair
ptm03420
Nucleotide excision repair
ptm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSPATT00027123001
03410 Base excision repair
GSPATT00027123001
03420 Nucleotide excision repair
GSPATT00027123001
03430 Mismatch repair
GSPATT00027123001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptm03032
]
GSPATT00027123001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00027123001
DNA replication proteins [BR:
ptm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSPATT00027123001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSPATT00027123001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RuvB_N
PTCB-BRCT
AAA_16
AAA_14
RCF1-5-like_lid
nSTAND3
AAA_5
AAA_6
AAA_22
RNA_helicase
NTPase_1
AAA_19
Tugs
AAA_18
Motif
Other DBs
NCBI-GeneID:
5047957
NCBI-ProteinID:
XP_001462172
Genoscope:
GSPATT00027123001
UniProt:
A0EHK8
LinkDB
All DBs
Position
undetermined
AA seq
972 aa
AA seq
DB search
MSNSRKRLIRNSPESKSNHTEVLSDIEEEYNLNNYKYDAKSKNGQQKQKQQQQQAQKQTQ
QSMGEKQTPQISDVFPNQNQSKTNQPQNLSQSQKKPSAQRQPNQPNQPNLFQFFGKSVLL
NPSQGSQGKLKESIIKRSNDINVDDINIQEQFEIERKIQEQYKNKQQSQQQIQPQSQQQQ
TYRQKQDPYQDSGNEIIEKLNRIGLDKNNKSTSPRHLGPDIKQSFEIQIEQQPQAKKKKG
AVNITWEKQNSKVLKPENKKQIEQEHQPEFKNDPDLLKGLTIVLSGLLNVCSRDKLEQFL
KNNGAKVTGSISGKTSYLIVADKLEDGRKGEEGNKFKEATKKGTKIVRESELNDWLIDKI
GVGMEEIFPDSNLSKLYKKSGSKKQDQPENVNLDKNLSLADKYMPKLLSDLVDNKSSVTQ
LNDWIYKFQHPNSAEEQNQKQKKRFIPLKMGRFQPVGNITSKACIISGPPGIGKTSMVRL
VAEALGLKLIVNNASDKRNKGSLRSVLNDLVDNSVLMNLFRPNKDFIIVMDEVDGMTGSD
RGGISALIECIKSTRVPIVCICNDIDNQKLKSLLAHCYSIKFQKPDAKSVAKRLKYICEQ
ENINMNLEDLEKLAICFDCDIRQSINMLELQKLQSKAKMFQPNAFKKDKVCVFNTFNAAL
SLLNRNQRRQMSLRDMLDMFFLDYDLIPLIIQDSYILSHHSDINNVAKAAELIAEGDIIS
KKIRRDQQWSLMPSFGFLSSVYPSCIVGEQMDFPKFPQWLGKNSTASKIRREGHQIKNRI
APITYLTSDIRLYSHYLFQLIKQFLELKIVRNDKDAVWSVVQIMEEYRITPDQLKEDLHD
QVFNPLKDNLLSTINAQVKTQLTKMYNKRHVILKEKAAKRQVNAERYLSENYNPLIGEEA
PLVEQSQKEIEEEENKNEEENTRGSKVKKTKKQTKKQAKKGTKKRQLDEEKSIDEDSLGS
MNNFIVDDEDEE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcccgaaaaaggttaattcgtaattcacctgagagtaaatcaaatcataca
gaagttctttcagatattgaagaagagtataatcttaacaattataagtacgatgccaaa
agcaaaaatggttaacaaaaataaaagcagcaataataataagcttaaaaataaactcaa
taatcaatgggggaaaaataaacaccacagatttctgatgtgtttcctaattaaaattag
tccaaaactaattaaccctagaatttatcataatcataaaaaaagccatccgctcaaaga
tagcctaattaacctaattaaccaaatctattttaattttttggaaaaagtgttcttctt
aatccctcataaggttcataaggaaaattaaaagaatccataataaaacgatctaatgac
attaatgttgatgatattaatattcaagaataatttgaaatagagagaaaaatctaagaa
tagtataagaataaataacaatcttaatagcaaattcaaccataatcgtaataacaataa
acatacagacaaaaataagatccatattaggacagcggaaatgaaataattgaaaaatta
aataggataggtttggataaaaataataaaagcacatcacctagacacttaggacctgat
ataaaataaagttttgaaatccaaattgaataataaccataagctaaaaaaaagaaagga
gctgtcaacatcacatgggaaaaacaaaactcaaaagtcttaaagcctgaaaataaaaag
taaattgaataagaacatcaaccagaatttaaaaatgatccagatttacttaagggttta
acaatcgttttgagtggtttattaaatgtttgcagtagggacaaactggagtagttctta
aagaataatggagctaaggtcactggcagtatttctgggaagactagctatttaattgtg
gcagacaagttagaagatggaagaaaaggagaagaaggcaataaatttaaagaggctaca
aaaaaaggaacaaagattgtaagagaaagtgagctaaatgattggcttattgataaaata
ggtgttggaatggaagagatttttccggactcgaatttatctaaattgtacaagaaatca
ggatccaagaaataggattagccagagaatgtaaatttagataagaatcttagcttagct
gataaatacatgccaaaattattgtctgatttagttgataataaatcaagtgtaactcaa
ttgaatgattggatatacaaattctagcatccaaattcagcagaggaataaaattagaaa
tagaagaaaagatttatacccctaaaaatgggtagattctaacctgttggaaatattacg
tctaaagcatgtataataagtggtcctccaggaattggtaagacttcaatggtaagatta
gtagccgaagctttaggattgaaattaatagtaaacaatgcatcagacaagagaaacaaa
ggaagtttgagatctgtattaaatgatttggttgacaacagtgtgcttatgaatctattt
agacctaacaaggactttataattgtaatggatgaagtagatggaatgactggatcagat
agaggtggaatatcggctttaatagaatgtataaaatccactcgagttccaattgtttgt
atttgtaatgatattgacaactaaaaattaaaatcgttgttagctcattgttatagtatt
aaattttagaagccagatgcaaaatcagttgcaaaaagattaaaatacatttgtgaataa
gagaatataaatatgaatcttgaagatctcgaaaaattggctatatgctttgattgtgat
atcagataaagtattaatatgttggaattataaaaattgtaatcaaaagcaaagatgttc
taaccgaatgcattcaaaaaagataaagtctgtgtttttaatacatttaatgcagcttta
agtttactcaatagaaatcaaagaagatagatgtcactaagagatatgctggacatgttc
ttcttagattatgacttaattcctcttattatttaagacagttacattttatcgcatcat
tcagatattaataatgttgctaaagcagctgaattaatagctgaaggagatataatatca
aagaaaattcgaagagatcaacaatggtcattaatgccatcctttggattcttatcaagt
gtctatccttcgtgtattgttggggaatagatggattttccaaaattcccataatggttg
ggaaagaattcaactgccagtaaaattagaagggaaggacattaaataaaaaatagaata
gctccaattacttatttgacatcggatatcagattgtattctcactatttgttttagttg
ataaaacaatttttagaattaaaaatagttcgaaatgataaagatgctgtttggagtgta
gtttaaattatggaagaatatcgaattactcctgattaattgaaagaagatcttcatgat
taagtattcaacccattgaaggataatttattgagcactattaacgctcaagtcaaaacg
caattaacaaaaatgtataataaaagacatgtaatattaaaggaaaaagcagctaaaaga
taagtcaatgctgaaagatatttgagtgaaaattataatcctttaattggtgaagaggca
ccattagttgaatagtcttaaaaagagattgaagaagaagaaaacaaaaatgaagaagaa
aatacaagaggttcaaaagttaagaaaacaaaaaaacaaaccaaaaaataagctaaaaaa
gggacaaaaaaaagataattagatgaagagaagtcaattgatgaagattctctaggatct
atgaataattttattgttgatgatgaagatgaagaatga
DBGET
integrated database retrieval system