Paramecium tetraurelia: GSPATT00029346001
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Entry
GSPATT00029346001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00029346001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00029346001
Spliceosome [BR:
ptm03041
]
Complex A
U1 snRNP components
U1 related factors
GSPATT00029346001
Complex B
GSPATT00029346001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
5011900
NCBI-ProteinID:
XP_001426116
Genoscope:
GSPATT00029346001
UniProt:
A0BJK1
LinkDB
All DBs
Position
undetermined
AA seq
657 aa
AA seq
DB search
MDSIEKEGDNERGYWSKHSSANGQTYYYNVKTGQSQWEKPECLQDEESEVEEEWQQYLTE
DGKPYWYNRNTRESKWQKPEEEQDTSGEEEDIIPPNPIDQFTQLLKDNKITSSVKWDSVV
KQLQSDSRWKCIGSISHKKKIYNQYLEEMKKQEKEENKTKLSMAKEDFMKMLEEHKILSS
DIKLWKVQSYLVTDARWKAIPDEKERENLFQDYLDKLYKQEQELMKESRKTTTEDFRKRL
QRHIEIGVLSHSSTWDECLKLFSQDRLLQQMLPIDALGVFEEVINPLYEQWRQSIISKYR
QNRINFRELLQEHLAEGLLTHKTKWGQFVQTIQQDDRFICMLGQPGSQPHELFQDFISNL
KQNHQLYKSELKMHLQQKGVKVLTNVSFEEVEAYFVDNQIWTKMPSHEKKYYYRYFQENI
KQSSNIQSKRYKKMCKRYIKLLKSLPDYKSYEEMLPIINQKIQENPKLAGLVEEQKKAQY
ESFVATLQQLQQQQQQTQSQQIPIVPIVSQQQQQSQVQQTQQIQQQQQQQQQQQQQQQQP
QQQQQQQQQQLQQQSTQIQEEPIQQQQQTSEKDQSERKKKKKKEKKEKKEKKSKEEGSVR
QDLSQVEPEKSKNVKQEHEPEPGEIQPNYDFNDQEKSKSKGKKHHKSHHKSKKHHKQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatagcatcgagaaggaaggggacaacgagagaggatattggtcaaagcactcttct
gccaacggatagacttattactacaacgtgaagacaggccaatcctagtgggagaaacca
gagtgtctttaagatgaagaatctgaagtagaagaagaatggtaacaatacttgacagag
gatggtaagccttattggtacaatcgcaatacaagggagagtaaatggcagaagccagag
gaagagcaagatacatcaggtgaggaagaggacatcatcccgccaaatccgattgactaa
ttcacgcaattactgaaggataataagattacttcaagcgtaaagtgggattcagttgtg
aagcaattgcaaagtgattcaagatggaaatgcatagggagtatcagtcataagaagaag
atctacaatcagtatttggaggagatgaagaaacaagagaaggaggagaacaaaaccaaa
ttgagcatggcaaaggaggattttatgaagatgttggaggaacacaagatcctctcttcg
gacataaagttatggaaagtataaagttatcttgttacagatgcaagatggaaagcaatc
cctgatgaaaaggaaagggaaaatttattccaggattatttagataagttatataagcaa
gagtaggagctgatgaaggagagtcgcaaaactaccactgaggatttcagaaagaggtta
caaagacatatagaaataggagtcttaagtcatagttccacttgggatgagtgcttaaag
ttattcagtcaggatagactcttgtaacagatgttgccaatcgatgctctcggagttttc
gaagaggtcatcaatccgctctatgaacaatggagatagtcaatcatctctaaatacagg
tagaataggatcaacttcagggaattgctctaggaacacctggcagaaggcttattgaca
cataagactaaatggggttaatttgtatagacaatataataagatgatagatttatttgc
atgctcggacaaccaggctctcaacctcatgagttgttttaagatttcatttcaaattta
aagtagaaccactagctctataaatcggagttaaagatgcatctctaacaaaagggagtc
aaggtgttgaccaatgttagctttgaggaagtggaagcttactttgttgataactagatc
tggacgaaaatgccatctcatgagaaaaaatattattatcgttacttccaagaaaacatt
aagtagtcatccaacattcagagcaaacgatataaaaagatgtgtaaaagatacattaaa
ttattaaaatcattgcctgattacaaatcttatgaggagatgttaccaatcatcaattaa
aagattcaagagaatcctaaactagcaggtttggttgaagagtaaaagaaagcacaatat
gaatcatttgtggccactctccagcaactgtaataataataataacaaacctaatcctag
caaatacctatcgtacctattgtgagttaataataataataatcgtaggtttaatagacc
caataaatttaataacaataataacaataataataataataataacaataataataacca
taacaataataataacaataacaataataattataataataatctactcaaattcaagaa
gagcctatttaataataataataaacctctgaaaaagattagagtgagagaaagaagaaa
aagaagaaggagaaaaaggagaagaaggaaaaaaaatcaaaggaagagggctctgttaga
caagatctcagtcaagttgaacctgaaaagtctaaaaatgtgaaataagagcatgaacct
gagcctggagaaattcagccgaattatgattttaatgattaggagaaatccaaaagcaaa
ggaaagaagcaccataaaagtcatcataagagcaagaagcatcacaaataatga
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