Paramecium tetraurelia: GSPATT00029413001
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Entry
GSPATT00029413001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03013
Nucleocytoplasmic transport
ptm03015
mRNA surveillance pathway
ptm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSPATT00029413001
09122 Translation
03013 Nucleocytoplasmic transport
GSPATT00029413001
03015 mRNA surveillance pathway
GSPATT00029413001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00029413001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00029413001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSPATT00029413001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
EJC/TREX
GSPATT00029413001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
5011966
NCBI-ProteinID:
XP_001426182
Genoscope:
GSPATT00029413001
UniProt:
A0BJR7
LinkDB
All DBs
Position
undetermined
AA seq
151 aa
AA seq
DB search
MQNNQTDEFYLRYYVGHKGVYGHEFLEFEFRSDGRLRYANNSNYKSDVLIRKECYVSESV
ISEFKRIIEESEIIKENDSKWPAPDKIGRQELEIKLGNAHISFTTSKLGSIHDVQSSQDP
DGLRVFFYLIQDLKCFVFSLIGLHFRIKPVN
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattaaaccgatgagttttacctcagatattatgttggacataagggtgtg
tatgggcatgaattcctggagtttgaattcagaagtgatggaagattacgttatgcaaat
aattctaactataaatcagatgttttaatcagaaaggagtgttatgtttctgagtcagtg
atttcagagttcaaaagaataattgaagaatcagaaataataaaagaaaacgattcaaaa
tggccagctccagataaaatcggaagataggaattggaaattaaattaggaaatgcacac
atttcatttactacatcaaaactcggatcaatacatgatgtataaagcagttaagaccca
gatggcttaagagttttcttttacttgatccaggatttgaaatgctttgtgttttcatta
ataggacttcattttagaattaaacctgtgaattga
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