KEGG   Paramecium tetraurelia: GSPATT00030191001
Entry
GSPATT00030191001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03020  RNA polymerase
ptm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GSPATT00030191001
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSPATT00030191001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptm03021]
    GSPATT00030191001
   03400 DNA repair and recombination proteins [BR:ptm03400]
    GSPATT00030191001
Transcription machinery [BR:ptm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     GSPATT00030191001
  RNA polymerase III system
   RNA polymerase III
     GSPATT00030191001
  RNA polymerase I system
   RNA polymerase I
     GSPATT00030191001
DNA repair and recombination proteins [BR:ptm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GSPATT00030191001
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 5012739
NCBI-ProteinID: XP_001426955
Genoscope: GSPATT00030191001
UniProt: A0BLZ0
LinkDB
Position
undetermined
AA seq 223 aa
MIEEEYRPEDKASFKKKYKIFQTLASMIRQRGYFESTPAKLVEDETFEIFESKYRDNLPE
KIVCFKRDDESDKLLIIFYTKQAPLTHEEAKKTIQDFSNRQVKRLIMIFPTDPFATKPQV
VDKKARLFIDQVNSIQTYSFELFGEDDLVYDVTKHELVPQHIILNDREKELLLKKYGLVD
NQLPRILQSDPIARFLGLHHGDVVKIIRKSETAGLYVTYRIAI
NT seq 672 nt   +upstreamnt  +downstreamnt
atgattgaggaagagtacagacctgaagacaaggcttccttcaaaaagaaatacaaaata
ttttagactcttgcttcaatgattagataaagagggtattttgaatctactcctgctaaa
cttgtagaggatgagactttcgaaatatttgagtcgaaatatcgcgataatttaccagaa
aaaatcgtatgcttcaaaagagatgatgagtctgataaattacttatcatcttttacact
aaataagcacctctcactcatgaagaagcaaaaaaaaccatttaagatttctccaacagg
taagttaagagactcatcatgatatttccaactgacccttttgcaacaaaaccacaggtc
gtggataaaaaggcaagattgtttatcgatcaagttaattccatttaaacttactcattt
gagttgtttggagaagacgatttagtctatgatgttaccaagcatgaattagtgcctcaa
catattatcttgaatgacagagaaaaagaattattattaaaaaaatacgggttagtagat
aatcaattgccaaggattctacaaagcgaccccattgccaggtttttgggactccatcat
ggtgatgtagtaaagatcataagaaaaagtgaaacagcaggattatatgttacctacaga
atagccatatga

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