KEGG   Paramecium tetraurelia: GSPATT00031622001
Entry
GSPATT00031622001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ptm  Paramecium tetraurelia
Pathway
ptm03082  ATP-dependent chromatin remodeling
ptm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GSPATT00031622001
   03083 Polycomb repressive complex
    GSPATT00031622001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptm03036]
    GSPATT00031622001
Enzymes [BR:ptm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GSPATT00031622001
Chromosome and associated proteins [BR:ptm03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GSPATT00031622001
   HDAC complexes
    Sin3A-HDAC complex
     GSPATT00031622001
    BRAF-HDAC complex
     GSPATT00031622001
    REST complex
     GSPATT00031622001
    SHIP complex
     GSPATT00031622001
    MiDAC complex
     GSPATT00031622001
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GSPATT00031622001
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GSPATT00031622001
  Chromatin remodeling factors
   NuRD complex
    GSPATT00031622001
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 5014573
NCBI-ProteinID: XP_001428789
Genoscope: GSPATT00031622001
UniProt: A0BS74
LinkDB
Position
undetermined
AA seq 474 aa
MQNETNKRVAYFYHPQIGRYHYGKEHPMKPKRIAMAHNLIVNYGLYRNLDVYMNRQASLK
EMEKFHEPEYLQYLSQFTSVRSQIVNEYQHYNQQPNITHFTSHIYNEFDLLDYNIPHTHE
PIETNNNYPQPNSFRVGDSTDNPSFPGLYDFCQLSAGGSIDAAHVLISQDAEIAINYSGE
RPVGFCYVNDIVIAILELLRVHQRVLYVDIDVHHGDGVEEAFLLTNRVMTCSFHQYGDDF
FPGSGDIDSYGEGLGRYHALNIPLKIGMNDETFTEIFQKIITQVMDIYRPEAVVLQCGAD
SLCHDRLGGYNLSTKGHGACVEFMIKYNVPILVLGGGGYTIQNVARCWAYETGLCLNKKI
DAPIPTSEIYYEYYAPDYKLHFPIKQNVENKNKKEELQRIVEKIYGYLKSIEPVPGIGFH
DLPQSFYPEMNVEEEINPDQRYEQTLNQFEGAHYEEGNEILVDPSNGFSIHRRE
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcaaaatgagactaataaaagagtggcctatttttatcatccccaaatagggagatat
cattatggtaaggaacatccaatgaaaccaaaaagaattgcaatggcgcataatttaatt
gttaattatggtttgtaccgaaacctggatgtatatatgaatcggtaggcttcattgaaa
gagatggagaaatttcatgagccagaatatttgcaatatttgagtcagttcacaagtgtt
agaagtcaaattgtgaatgagtatcaacactataatcaacagccaaatatcactcacttt
acaagccacatctacaacgagtttgatttgttagattataatataccacatactcatgag
cccatcgagacaaataataattatccataaccaaatagtttcagagtaggagactccact
gataaccccagctttccaggtctatatgacttttgccaattgtctgcaggaggatcaatt
gatgctgctcatgtgttgatttcataagatgcagaaatagccattaattattcaggagag
aggccagtgggattctgttatgtgaatgacattgtgatagccatattggaattgttgaga
gtacaccagagagttttgtatgttgatatcgatgttcatcatggagatggagttgaagag
gcatttcttctcacaaatagagtgatgacttgttcattccatcaatatggagatgatttc
tttccaggctcaggagatattgacagttatggagaaggattaggtcgatatcatgctctc
aatatccctttgaaaattggtatgaatgatgagaccttcacagaaatattccagaaaatc
atcacctaagttatggatatctatagaccagaggctgtagtcctgtaatgtggagctgat
tcactatgtcatgatagattgggaggatataatttatcaacaaaaggtcatggtgcttgt
gttgaattcatgattaaatacaatgtgcccatcttggtattaggaggaggaggatataca
atctaaaatgtagctagatgttgggcatatgagactggattgtgtttaaacaaaaagatt
gatgctcctattcccacttctgaaatctattatgaatattatgctccagactacaaattg
catttcccaataaaacaaaatgtagaaaacaagaataagaaggaagaactccaaagaatc
gtagagaaaatatatgggtatctcaaatccattgaacctgttcctggcattggttttcat
gatttgccttaatcattttatccagaaatgaatgtagaggaagaaatcaatcccgatcaa
cgttatgaataaacattaaattaattcgagggagcccactatgaagaaggaaatgaaatt
ttagttgatccatccaatggattctcaatacatagaagagaatga

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