Paramecium tetraurelia: GSPATT00034196001
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Entry
GSPATT00034196001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00034196001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSPATT00034196001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
Complex C specific factors
GSPATT00034196001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
Cas3-like_C_2
CATSPERB_Ig-like
HA2_C
AAA_22
HA2_N
Nucleo_LEF-12
Motif
Other DBs
NCBI-GeneID:
5017901
NCBI-ProteinID:
XP_001432116
Genoscope:
GSPATT00034196001
UniProt:
A0C1Q2
LinkDB
All DBs
Position
undetermined
AA seq
708 aa
AA seq
DB search
MLIQSKGNVIHENLPIRAYKEQILYGVDTNSTLIILAETGSGKTTQIPQYLIEAGYGGED
RVLVSLPRKMAAISIAQRVSDENGTELGQDIGYRVRFESKVSENTKIEYVTDGTLIQIIM
GNPLIEGYSVVMLDDIHERTLNTDLLLCLIKKIQKKRPELKVIVSSATMEVDLLQNFFPN
SKIIAIRGRNYEVDIMYLLEPCKNYVIAAVELAYHIHKKMPEGDVLVFLTSVEEIHAFIN
LWSHHKANCVVLPLHANLGIDKQLLVFKQHASRKIIVSTNVAESSVTIDGIVYVIDSCYQ
KVKVYDYKRNLEQLNILPISQQSGAQRAGRAGRTRDGICYRLCTKEDYQNLPKTFPPEIL
RSNLTELILQIRSFSLTPNHLQCSNTFLTPVSNEQLINCINILMSLKLIDENFSLTELGN
AIVDYPLETQLAVCVENSFLEEFQCSDEMLKIASILSIQGGIFSSDATPLQMLKAKKALG
CREGDVLSLHNIFVRYINIGNKGNWCDTYRVSKYKLESAGKIYKQIQKKRKNRQIKSSIQ
DVEAIQRCFVSGFFSQVAQRENTAREGVYRNIYTKQLVHLHPASVLTVSYPEWVIYHELI
EQNHKLTMHNVTELDPHWLFEIAPHFYRDARQEIAEMKHQQEKDQLDKIEAEKQQKQQEL
LMNQESKVVFGSIKQRKPGFKGFGQTQFPIKSKEQRLGSLSFNDEEDF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcttatttaatcaaaaggaaatgtcatccatgaaaatctgccaattagagcatataaa
gaataaattttatatggagtcgataccaatagcacattgattatcctagctgaaacaggg
tcaggcaaaacaacttagataccataatatttaatagaagctggttatggtggagaagac
agagttttggtctcgttgcctagaaagatggctgccattagtattgcataaagagtatct
gatgaaaatgggactgaattgggataggacattggttatcgagtgagattcgaatcgaaa
gtgagtgaaaatacaaaaattgaatatgtgactgatggaacattgatttaaatcataatg
ggcaatccattgattgaaggatattcagttgtaatgctcgatgatattcatgaacgcact
ttaaatacagatctcttgttgtgtttaatcaagaagatccaaaaaaagagacctgaattg
aaagtgatagtttcatctgctacaatggaagttgatttactgtaaaactttttcccgaat
agtaaaatcattgcaatcagaggtaggaattatgaagttgatattatgtatctactagaa
ccatgtaaaaactatgtgattgctgctgtggaattagcatatcatattcacaaaaagatg
ccagaaggtgatgttcttgtgtttttaacatctgttgaagaaatccatgcatttatcaat
ttatggtcacatcataaggctaattgtgtagtattaccacttcatgccaatttgggcatt
gataaatagttgctagtgtttaaatagcatgcaagtagaaaaattatagtatcaaccaat
gtggcagaaagtagtgtcactattgatggaatagtatatgtgatagattcatgttatcaa
aaagtaaaagtttatgattataagagaaatttggaataattaaatattttacctatttcc
tagcaatctggtgcatagagagcaggcagagctggaagaacgagagatggaatttgttat
agactatgcactaaggaagattattaaaatttgcctaagaccttccctccagaaatattg
agatctaatctcacagaactcattttatagattagatcattctcactaacaccaaatcat
ttacaatgtagcaatacatttttgactcctgtttcaaatgagtaattaatcaattgcata
aacattttgatgagtttaaaattgattgatgaaaacttttcattaacagaattgggaaat
gccatagttgattatccattggaaacataattggcagtttgtgttgaaaacagctttcta
gaggagttttaatgttcagatgagatgttgaaaatagccagtattctcagtatacaagga
ggtatctttagtagtgatgcaacaccattataaatgttgaaggccaagaaggctttggga
tgtagagaaggagatgttttatcacttcataatatatttgttagatatattaacattgga
aataaagggaattggtgtgatacctacagagtatcaaaatataaattagaatcagctgga
aagatctacaaataaattcaaaaaaaaaggaaaaacaggtaaattaaaagttccatccaa
gatgtagaggctatttaaagatgctttgtttctggtttcttctcttaagtagcataacga
gagaatacagcaagggaaggtgtttacaggaatatctatactaaacaattagttcatcta
catcctgcttcggttttaacagtttcataccctgaatgggtaatttatcatgaattgatt
gaacaaaatcataaactaaccatgcacaatgttactgagcttgatccgcattggcttttt
gaaatagctccccatttttatagagatgctagataagaaattgctgagatgaaacactaa
taggagaaggattagttagataaaatagaggctgagaaatagtaaaagcaataggaattg
ttgatgaattaagaaagcaaagtggtttttgggagcatcaaatagagaaaaccaggattt
aaagggtttggttaaacatagtttcctattaagagtaaagagtaaagacttggctcattg
tcatttaatgatgaggaggacttctga
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