Paramecium tetraurelia: GSPATT00034666001
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Entry
GSPATT00034666001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00034666001
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00034666001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSPATT00034666001
Spliceosome [BR:
ptm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GSPATT00034666001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSPATT00034666001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
DUF5646
ZNF380_CC
Motif
Other DBs
NCBI-GeneID:
5018355
NCBI-ProteinID:
XP_001432585
Genoscope:
GSPATT00034666001
UniProt:
A0C321
LinkDB
All DBs
Position
undetermined
AA seq
564 aa
AA seq
DB search
MSNSQIQSDSEEFIQQQEKGDLNFYSGLFDPCEEVPQKPQETQTIKDKVIQQTKQTFSKQ
STLNQKIKSKLNKVALKIRKQNEQFYEEPEQVEEEDPQQDLQQEQQLDSKIFAIDTEFHQ
LKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPIMQRFGN
LKNLQYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETELRKYPDII
IATPGRTVDLLTNSSSLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKDRQTVLISA
TLNATVKQLSLLALNNPIKVNVDFVGGLAYGLKQYLLRIRSNQDSDREATLITLLKTKFK
EKTIIFVKTKHDCHRLAIVLGFLDMSSCELHGNLSQQQRIQAYEDFKEGKFQFLLATDLA
ARGLDLTDVKAVINYEIPYEVTRYIHRVGRTARIGAQGISVTICLENEVVKFKKMIRQSK
QQLFKMIADTNKVRQMRRQIQQLEPQIRKVIKEEVAEMEVRKTEMMTQKGEIPMEESEDD
DNIPEPKKGKPQMKNKKRAKKFNN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactcataaatccaatcagattccgaagaattcatctaacaataagaaaaggga
gatctcaatttttattctgggttgtttgatccttgtgaagaagttccccaaaaaccccaa
gaaacctaaaccataaaggataaggtaatacaacaaactaaacaaacctttagtaagcaa
tccaccttaaattaaaaaattaaatcaaaattaaacaaagttgccttaaaaatcagaaaa
cagaacgagcaattttatgaagagccagaacaagtagaagaagaggatccataacaggat
ctctaataggaataataattggattcaaaaatatttgcaattgacacagagttccatcaa
ttaaaattaaataaggcattagtcaaagcttgtcatgattagggatatactcatcccacc
aatgtttaggctaaaataatcccaataattatgaatggtaaagatgtcttggctagttca
tgtacgggatctggcaaaacagcagcattcctattacccatcatgtagcgttttggcaat
ttgaaaaatttacaatactccaaagccttgataatattgccgactagggaactcgcactt
taatgctttgaaatgtttgaaaaattaaataaatatgctaattgcacagcagctctcgtc
attggggctgttccaatctagtaataggaaactgaattgaggaaatatcctgacatcata
attgcaactccaggtagaactgttgatttattaactaattcatcaagtcttgaaattcag
aatattgaaatcttagtattcgatgaagcagatagattaatggaaatgggattcgaaaag
gaaatcaggtaaatcctttaagccacttccaaagatagacagactgttttgatcagtgct
actcttaatgctactgtcaaataactatccttattggctttgaataatccaataaaagtt
aatgttgactttgtgggtggtttggcttatggattaaaacagtatttgttgcgaataaga
tccaattaagacagtgacagagaagcaacactcattactttattgaaaaccaagttcaaa
gaaaaaaccataatctttgttaagaccaaacatgattgtcataggttggcaatagttcta
ggatttttagatatgagcagttgtgaattacatgggaatctatcataacaataaagaatc
caagcctatgaagattttaaagaaggaaaattttaatttttattagcaacagacttagct
gcaagaggattggatctgacagatgtcaaagctgtgattaattatgagattccatatgaa
gttacgaggtacatccacagagtcggtagaacagctaggataggtgcataaggtatatca
gtaacaatttgtttggagaatgaagttgtcaaatttaaaaagatgatacgataatctaaa
taatagttattcaaaatgattgcagataccaataaggttagataaatgcgtcgtcagata
tagtagttggagccttaaatcagaaaggttattaaagaggaggttgctgaaatggaagtt
cgaaaaactgagatgatgactcaaaaaggcgaaattccaatggaagaatctgaagatgat
gataatattccagaaccaaaaaaaggaaaaccacaaatgaagaataagaaaagagctaag
aaattcaataattga
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