Paramecium tetraurelia: GSPATT00035446001
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Entry
GSPATT00035446001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GSPATT00035446001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00035446001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
GSPATT00035446001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
HTH_70
Motif
Other DBs
NCBI-GeneID:
5019499
NCBI-ProteinID:
XP_001433714
Genoscope:
GSPATT00035446001
UniProt:
A0C6A0
LinkDB
All DBs
Position
undetermined
AA seq
738 aa
AA seq
DB search
MAGKEATLVLLDVGASMYEPYKQAQGKNITRLELAVDCIGMMIQQKIFNYKNHEVGLVLF
GTEEAEDGNTFYIQVMSPPDLEFYRNLTELPNHDVPKIKGGDIFDALDKAVSTLDEYVKA
KKMEKKIFVLTAGFGQTDYNEKKIGKLIKMIEKVDVKINFIAMDFMNEYDVELDDPTKPE
NQATLNDRMLNAVYQHQEQSINSRLIYQMVQELRNHMRIFPANIAFELYSQFHTKQMQAR
ASFRGDFQINDETSIQVLIYKRCAEDRLPSLKKHSAIGEYSSEPTRNIVRNDSIHYNPED
PNMNPIERENIIKGYQYGRNLIPVDSLMEEKMKYQCNRSFQLLGFVERSQIPRHYFIFNV
DMVIAIDCEKARKSLSALIIALIATKKVAIARFVGRQKSSPKLMLLLPHKSKSYQCFWMI
SLPTSEDIRHFQFSTLRKSTPNQQSAVATLIDKMNLETIPNESGEPEELLKMKYIANPTR
QYFQQVVMHKAITRTDVIPPISPLILDYLHPERRVYNYAQDAIQRVKNAFKFKVNDIKKP
QDKKVFWKQLFDEQTAQQQVPEQIEEEIVEINREEEEMVNMFAKQKFGFNDDIIQEIGSV
DPISDFKKMITEKRVDLVDSALQQIQKVINALVDQSVKGSFFPKALECLKEMRKACISED
EAPVFNKFLFVLKDKYNQQLFWAQIVQQGITLISDIENHKSSVTAEEAQDFLNKEDNKHQ
QMVDQLQNEEEDLLADIE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaagaagcaactttagtattattggatgtgggtgcctcaatgtatgaacca
tacaagtaggctcaaggaaagaatatcacaagattggaattagctgttgattgtatagga
atgatgatctaataaaaaatctttaattacaaaaatcatgaagtcggattggttctgttt
ggaacagaagaggctgaggacgggaatactttttatatttaagtaatgtcgcccccagat
ctagaattctatagaaatctgacagaattaccaaatcacgacgttcctaaaataaagggc
ggagatatttttgatgcattggataaagcagttagtactttggatgaatacgtaaaggcg
aagaagatggaaaagaagatatttgtactaacagcagggttcggatagacagattataat
gagaaaaaaataggaaagttaattaagatgattgaaaaagtagatgtgaaaatcaatttc
atagccatggattttatgaatgaatatgatgttgaattggatgatccgaccaaacctgag
aattaagctaccttaaatgatcgaatgcttaatgctgtctactaacattaagaacaatca
ataaattctcgtttgatttattaaatggtttaagaacttaggaatcatatgagaatattt
ccagccaatattgcatttgaattatattcacaatttcatacaaaataaatgcaagcaaga
gcatcatttagaggagatttctaaataaatgatgaaacatccatttaagtattaatctat
aagcgatgtgcagaggatagattacctagtttaaagaaacattcagctattggagaatat
agtagtgagccaactagaaacattgttagaaatgacagtattcattacaatccagaagat
cccaatatgaatcctattgagagggaaaatatcattaagggctatcaatatggaagaaac
ttaattcctgttgatagtctcatggaagagaagatgaagtattaatgtaatagatcattt
taattgcttggtttcgtagagagatcttaaatccctcgacattatttcatattcaatgta
gatatggtgatagctattgattgtgaaaaggctaggaaatcattgtctgcattgataatc
gctttgattgccactaaaaaagttgcaattgcaagattcgttggtagataaaaatcttct
cctaaattaatgttgttattgccccataaatcaaagagttattaatgtttctggatgatt
tctttacccacttctgaagatattagacatttccaattctctactttaagaaagtccact
ccgaattaataatcagcagtagctacgttgattgataaaatgaatttagagactatccca
aatgaatcaggagagccagaggaactattaaaaatgaaatacattgcaaatccaactaga
caatatttctaataagtggttatgcataaagccattacaagaaccgatgtcatccctcca
atctcacctttaattcttgattacttgcatcctgaaaggagagtatataattatgcctaa
gatgctatacagagagtgaaaaatgcatttaaattcaaagtaaacgatatcaagaagccg
taagataaaaaggtattttggaagtaattatttgatgaataaactgcataataataggtt
ccagaatagatagaggaggaaatagtagaaatcaatagagaagaggaagagatggttaac
atgtttgctaaatagaagtttggattcaatgatgatataatataagaaataggttctgtg
gatcctatctctgattttaagaaaatgatcactgaaaaaagggttgatttagtcgactct
gctcttcaataaattcagaaggttattaatgcactagttgattaatcagtgaagggaagt
ttcttccctaaggctttggaatgcttaaaggagatgaggaaggcttgtatttcagaagat
gaagctcctgttttcaataagttcctatttgtattaaaggacaaatacaatcagtaatta
ttttgggctcagatagtgcaataaggaatcactttgatcagtgatattgaaaatcataaa
tcctctgtcactgctgaggaggcttaagatttcttgaacaaggaagataataaacattag
taaatggtggactaattacaaaatgaggaagaagacttgctagctgatattgaatga
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