KEGG   Paramecium tetraurelia: GSPATT00036008001
Entry
GSPATT00036008001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K11374  elongator complex protein 2
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ptm03016]
    GSPATT00036008001
Transfer RNA biogenesis [BR:ptm03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    GSPATT00036008001
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 WD40_Gbeta WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_WDR41 PROPPIN Beta-prop_SCAP
Other DBs
NCBI-GeneID: 5020059
NCBI-ProteinID: XP_001434274
Genoscope: GSPATT00036008001
UniProt: A0C7W0
LinkDB
Position
undetermined
AA seq 720 aa
MKSIFISGGCNSVYNGLDVCQFEENQHLIAFPCSNQILVYDIKKLKIIYSYSIFNKRVNY
VRFLNATTLVAADGEGKIAIFNDSQVLYEAKLNESIQLFKVIGQYIIALSIDGLVTVLNL
ELKELSKLEFGNNVMENIDAIEFDKHTFVALSGVDTQIHLYILENNQLQYKASVKGHQRS
LNHLQFHLKNQEYLQLASASKDTYTRIWSIYKINEVEAKTKSFRIEQQLYSFKLETILQG
HIEEVSTVNWFDENTILSGSFDYNVIIWKQDKDTGLWLSVSRLGQTSGNKNQIFGLQTSF
DKQYIICYTLTGAIYIWKQEQDNWVEQPVVTGHYAEVTDLDFKDYVLTCSSDQTSRIFTK
WIKNDTYHEISRPQIHGYDLNAIKQIGNQIISGGDEKILRMFNPSPFTINQLNYLNEQNI
NSSVFLNQNIPSQIVTYNNRQFNEFKLATEGIQQALGLMNVQMQFEDEEDENVKNNEVEV
NLEIKYGQPPNDALLAKKSLWPETNKLYGHGYAIQAIAIHQNIAASSSVAITSKAAEIII
WDTNTFKIKQLLPCHNFTVVQLVFSRSGKYLISVSKDRCLGVFVKQDDDTYQILSKSQPC
SRIVYTCAFNNDESLIFTGSRDKKFRIYNTTEASVPIKEIEFQDEITAIDSVLLNNKQIV
AVAYGQGQLETFELTQTLELNLLSSVDKYHKHSKTINRIKFNNDLLASCSDDHTVRIYQI
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaaagtatattcatttcaggtggatgtaattctgtctataatggtcttgatgtttgt
taatttgaagaaaactaacatttgatagcatttccttgtagcaatcaaatattagtgtat
gacattaagaaattaaagattatctattcatattcgatatttaataagagggtcaattac
gttaggtttttgaatgcaactacattggtagctgcagatggtgaagggaaaatagcaata
tttaatgattcataagttctgtatgaggcaaaattgaatgaatcaatataattattcaaa
gtcataggtcaatatatcatagccttatcaatcgatggtctggttacagtattgaatttg
gaattaaaagaactatcaaagcttgagtttggtaataatgtgatggagaacattgatgca
atagaatttgacaaacacacttttgtagctcttagtggtgtggatactcaaattcatttg
tacattctagaaaacaattaattgcagtataaggcatcagtgaagggccatcagagaagt
ctaaatcatttgcaatttcacttaaaaaattaagaatatttacaattagcaagtgcatcc
aaagacacatacactagaatatggagcatctataaaattaatgaagtagaagccaagacc
aaatcttttagaattgaataataattgtatagtttcaaattggagactatcctctaagga
catatcgaagaggtttcaacagtgaattggtttgatgagaacacaatcttaagtggttca
ttcgattataatgtgatcatttggaagtaagacaaggatacaggattatggttaagtgtt
tcaagactagggcaaacaagtgggaataagaattagatatttggattgtaaacgtcattt
gataaataatacattatatgttatactttgactggagcaatttatatatggaaacaagaa
taggataattgggtagaatagcctgtagttacaggtcattatgcagaggtgacagatttg
gattttaaggattatgtattgacttgtagtagtgattaaactagtagaatattcactaag
tggattaaaaatgatacatatcatgaaatatctagaccataaatccatggttatgattta
aacgcaataaaacagattggaaattaaattataagtggaggcgatgagaaaatattaaga
atgttcaatccgtctccttttaccattaattagcttaattatttgaatgaatagaatatc
aattcatctgtttttttaaattagaatatcccttcacaaatcgtaacatataacaataga
caatttaatgaatttaaattagcaactgaaggaatacaataggcacttggattgatgaat
gtgcaaatgcaatttgaagatgaggaagatgagaatgttaaaaataatgaagtagaagtc
aatcttgaaatcaaatatggataacctccaaatgatgccttacttgcaaagaaatcatta
tggccagagactaataaattatatggacatggatatgcaatctaggcaatagctatacat
taaaatatagccgcctcatcttctgttgccataacatctaaagcagctgaaattatcatt
tgggatacaaacacattcaaaattaaataattattaccttgtcataatttcactgttgtc
taactagtcttctctaggagtggcaaatatttgattagtgttagtaaagacagatgttta
ggagtatttgttaaataagatgatgacacttattaaatactatcgaaatcatagccttgt
tcaagaattgtttacacttgtgctttcaataatgatgaatctcttatatttacaggaagc
agagataaaaaatttagaatttataacacaacagaagcttcggtgccaattaaagaaata
gaatttcaagatgaaataactgccattgattctgtcttacttaataacaaataaatagtt
gcagtagcatatggttaaggataacttgaaacttttgagttgacataaactctagagttg
aatttgctttccagtgtagataaatatcacaaacattcaaaaacaattaatagaattaaa
tttaataatgatttgcttgcctcatgtagtgatgatcacacagtcagaatatatcaaata
tga

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