Paramecium tetraurelia: GSPATT00036008001
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Entry
GSPATT00036008001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptm03016
]
GSPATT00036008001
Transfer RNA biogenesis [BR:
ptm03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
GSPATT00036008001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_WDR41
PROPPIN
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
5020059
NCBI-ProteinID:
XP_001434274
Genoscope:
GSPATT00036008001
UniProt:
A0C7W0
LinkDB
All DBs
Position
undetermined
AA seq
720 aa
AA seq
DB search
MKSIFISGGCNSVYNGLDVCQFEENQHLIAFPCSNQILVYDIKKLKIIYSYSIFNKRVNY
VRFLNATTLVAADGEGKIAIFNDSQVLYEAKLNESIQLFKVIGQYIIALSIDGLVTVLNL
ELKELSKLEFGNNVMENIDAIEFDKHTFVALSGVDTQIHLYILENNQLQYKASVKGHQRS
LNHLQFHLKNQEYLQLASASKDTYTRIWSIYKINEVEAKTKSFRIEQQLYSFKLETILQG
HIEEVSTVNWFDENTILSGSFDYNVIIWKQDKDTGLWLSVSRLGQTSGNKNQIFGLQTSF
DKQYIICYTLTGAIYIWKQEQDNWVEQPVVTGHYAEVTDLDFKDYVLTCSSDQTSRIFTK
WIKNDTYHEISRPQIHGYDLNAIKQIGNQIISGGDEKILRMFNPSPFTINQLNYLNEQNI
NSSVFLNQNIPSQIVTYNNRQFNEFKLATEGIQQALGLMNVQMQFEDEEDENVKNNEVEV
NLEIKYGQPPNDALLAKKSLWPETNKLYGHGYAIQAIAIHQNIAASSSVAITSKAAEIII
WDTNTFKIKQLLPCHNFTVVQLVFSRSGKYLISVSKDRCLGVFVKQDDDTYQILSKSQPC
SRIVYTCAFNNDESLIFTGSRDKKFRIYNTTEASVPIKEIEFQDEITAIDSVLLNNKQIV
AVAYGQGQLETFELTQTLELNLLSSVDKYHKHSKTINRIKFNNDLLASCSDDHTVRIYQI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtatattcatttcaggtggatgtaattctgtctataatggtcttgatgtttgt
taatttgaagaaaactaacatttgatagcatttccttgtagcaatcaaatattagtgtat
gacattaagaaattaaagattatctattcatattcgatatttaataagagggtcaattac
gttaggtttttgaatgcaactacattggtagctgcagatggtgaagggaaaatagcaata
tttaatgattcataagttctgtatgaggcaaaattgaatgaatcaatataattattcaaa
gtcataggtcaatatatcatagccttatcaatcgatggtctggttacagtattgaatttg
gaattaaaagaactatcaaagcttgagtttggtaataatgtgatggagaacattgatgca
atagaatttgacaaacacacttttgtagctcttagtggtgtggatactcaaattcatttg
tacattctagaaaacaattaattgcagtataaggcatcagtgaagggccatcagagaagt
ctaaatcatttgcaatttcacttaaaaaattaagaatatttacaattagcaagtgcatcc
aaagacacatacactagaatatggagcatctataaaattaatgaagtagaagccaagacc
aaatcttttagaattgaataataattgtatagtttcaaattggagactatcctctaagga
catatcgaagaggtttcaacagtgaattggtttgatgagaacacaatcttaagtggttca
ttcgattataatgtgatcatttggaagtaagacaaggatacaggattatggttaagtgtt
tcaagactagggcaaacaagtgggaataagaattagatatttggattgtaaacgtcattt
gataaataatacattatatgttatactttgactggagcaatttatatatggaaacaagaa
taggataattgggtagaatagcctgtagttacaggtcattatgcagaggtgacagatttg
gattttaaggattatgtattgacttgtagtagtgattaaactagtagaatattcactaag
tggattaaaaatgatacatatcatgaaatatctagaccataaatccatggttatgattta
aacgcaataaaacagattggaaattaaattataagtggaggcgatgagaaaatattaaga
atgttcaatccgtctccttttaccattaattagcttaattatttgaatgaatagaatatc
aattcatctgtttttttaaattagaatatcccttcacaaatcgtaacatataacaataga
caatttaatgaatttaaattagcaactgaaggaatacaataggcacttggattgatgaat
gtgcaaatgcaatttgaagatgaggaagatgagaatgttaaaaataatgaagtagaagtc
aatcttgaaatcaaatatggataacctccaaatgatgccttacttgcaaagaaatcatta
tggccagagactaataaattatatggacatggatatgcaatctaggcaatagctatacat
taaaatatagccgcctcatcttctgttgccataacatctaaagcagctgaaattatcatt
tgggatacaaacacattcaaaattaaataattattaccttgtcataatttcactgttgtc
taactagtcttctctaggagtggcaaatatttgattagtgttagtaaagacagatgttta
ggagtatttgttaaataagatgatgacacttattaaatactatcgaaatcatagccttgt
tcaagaattgtttacacttgtgctttcaataatgatgaatctcttatatttacaggaagc
agagataaaaaatttagaatttataacacaacagaagcttcggtgccaattaaagaaata
gaatttcaagatgaaataactgccattgattctgtcttacttaataacaaataaatagtt
gcagtagcatatggttaaggataacttgaaacttttgagttgacataaactctagagttg
aatttgctttccagtgtagataaatatcacaaacattcaaaaacaattaatagaattaaa
tttaataatgatttgcttgcctcatgtagtgatgatcacacagtcagaatatatcaaata
tga
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