Paramecium tetraurelia: GSPATT00036436001
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Entry
GSPATT00036436001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptm03009
]
GSPATT00036436001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSPATT00036436001
Ribosome biogenesis [BR:
ptm03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSPATT00036436001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CDC45
Cas3-like_C_2
AAA_19
Tim29
Motif
Other DBs
NCBI-GeneID:
5020839
NCBI-ProteinID:
XP_001435054
Genoscope:
GSPATT00036436001
UniProt:
A0CA40
LinkDB
All DBs
Position
undetermined
AA seq
729 aa
AA seq
DB search
MNWNQFEAIHQEVIQNLENNGFATPTPVQVEVLNNYQKHKHIIIASQTGSGKTLAFGIPL
ISEILKNMDKYPAKQIIALILTPTRELAMQIYKHLKAITNLSIGCLVGGMSKEKQKRIIN
AAPVILIATPGRLWDFIENEENDKIKNLNLIKFLIIDEADRMVELGHFPQLDNIMTKITT
PSQITHDKDRILSMMNEQSEAAYLNNQKITFEVEKPVEMSYEDFIKLQNGKGKIYIDNDV
IQNDIEEINKDDEVEQEGQEEQEVEEEEEQEQEDDVEEEEDEEEGEEGEEEDGEEGEDEE
QNEEDIQEEENEDEDDEQIQEDEDENDEVEENQQGKRKAKKEQKQKQKKKPQNFQQQEYT
LKTRNELRTFLVSATLTHQFKTGSKFQFLKTSKNDQQNSADKLLMKQMKATVPKLQSLLG
KLKVKEQPYIIDLTQQLVFPEKLQFYKSLMEEDDKLLHIYHWFKNNEDQTFIIFLNSITY
ANKVTSMLKVLGLPAVTLHSQQQQRQRLTKLDQFTAKKSNIMVCTDVAARGLDIVGVENV
IHYQVPFTADTFVHRCGRTARINREGKTLVLIGPKDMARFAKLESDLLSSGIKFEDFKLS
FNQVKKTRDMIKQAQRLEKEDHSLKKKKNMKDALQKQLKNDDFDLDEKELKQELENIEEE
LIQKRKKLDHEKMQYQQIVSQKNKLDGRFDRRRNGLFLTPEDTLQLAERLKHQKEMLQQK
QQYQKNKKG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaattaatttgaggcaattcactaagaggttatataaaatctagaaaataat
ggattcgctactccaacacctgtataagttgaagttcttaataattaccaaaagcataag
catattatcatagcatcttaaacaggatcaggaaaaacattggcatttggaattccatta
atttctgagatcttgaagaacatggacaaatatccagctaaacaaatcatagctttaatc
cttactccgaccagagagttggcaatgtaaatttataaacatttgaaagcaatcacaaac
ttgtctattggttgtttagtaggagggatgtctaaagagaaataaaaaagaattataaat
gcagctccagtgatattaatcgcaacaccaggcagattgtgggatttcattgaaaatgaa
gaaaatgacaaaataaaaaacttgaatctcattaaatttttaattattgacgaggctgac
agaatggtggaattgggtcattttccataactcgacaatattatgaccaaaattacaact
ccatcttaaataactcatgacaaagatcgaattctttccatgatgaatgaacaaagtgaa
gcagcttatctgaacaattaaaaaattacatttgaagttgaaaaaccagttgaaatgtct
tatgaagattttattaaattataaaatggtaaaggtaagatttacattgataatgatgta
atttaaaatgacatagaagaaataaataaagatgatgaagtagaataagaaggataagaa
gaataagaagtagaagaggaggaagaataagagtaagaagatgatgtggaagaagaggaa
gatgaagaagaaggagaggaaggagaagaagaagatggtgaagaaggagaagatgaagaa
taaaatgaagaagatatttaagaagaagaaaatgaagatgaagatgatgaataaattcag
gaggatgaggatgaaaatgatgaggtagaagaaaattagcaaggaaaaagaaaagcaaag
aaagaataaaaacagaaataaaagaagaaaccttaaaatttttaataataggaatacacc
ttaaagaccagaaatgaattaagaacatttttagtctctgccacattaactcattaattc
aagactgggtcaaaattctaattcttgaagacttcaaaaaatgattaataaaactcagca
gataaattattaatgaaacagatgaaagctactgttcctaaattataatcactcttaggt
aaattgaaggtcaaagaataaccctatataattgatttaacatagtaactagtattccca
gagaaattataattctataaatcattaatggaagaggatgataagcttttacacatctat
cattggtttaaaaacaatgaagattaaacattcatcatcttcttgaattcaattacatat
gcaaacaaagtgacatccatgctaaaagttcttggacttccagctgttactttacattct
taatagtaataaagataaagattaactaaattagattagttcacagccaaaaagagcaat
atcatggtttgcactgatgtagctgcaagaggtcttgatattgtgggtgttgaaaatgtt
attcattatcaagttccctttacagctgatacatttgtccatagatgtggtagaactgcc
agaatcaatagagaaggaaaaaccttagttttaataggaccaaaagatatggcaagattc
gctaaattggagagtgatttattaagcagtggaattaaattcgaagatttcaaattatcg
tttaattaagtgaaaaagaccagagacatgatcaagtaagcctagagattggagaaggag
gatcactctttgaaaaagaagaagaatatgaaggatgctttatagaagtaattaaagaac
gatgactttgatttagatgaaaaagaattgaagtaggaattggaaaatattgaagaggaa
ttaatttagaagaggaagaagttggatcatgagaagatgcaatactaataaatagtatca
tagaagaacaagttagatggtagatttgataggagaagaaatggattattcttaactcct
gaagatacactgtaattagctgaaagattgaagcatcagaaagagatgcttcaataaaaa
taataatactaaaaaaacaaaaagggttga
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