Paramecium tetraurelia: GSPATT00036448001
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Entry
GSPATT00036448001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03015
mRNA surveillance pathway
ptm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSPATT00036448001
09123 Folding, sorting and degradation
03018 RNA degradation
GSPATT00036448001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptm03019
]
GSPATT00036448001
03041 Spliceosome [BR:
ptm03041
]
GSPATT00036448001
Messenger RNA biogenesis [BR:
ptm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GSPATT00036448001
mRNA cycle factors
Stress granule specific factors
GSPATT00036448001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
Complex C specific factors
GSPATT00036448001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
DUF2114
Motif
Other DBs
NCBI-GeneID:
5020850
NCBI-ProteinID:
XP_001435065
Genoscope:
GSPATT00036448001
UniProt:
A0CA51
LinkDB
All DBs
Position
undetermined
AA seq
623 aa
AA seq
DB search
MGISFQNLSSLSLCINKISAKAGIASRKNQRNFKSYLLNRIQMLRFPGYQDQNKQSENGL
HIADLEEGITEEQLFVEFRKFGQISFVKLHRYPFIGKSKHYAFIYFSSQEEARKAKEAMN
YKQLLREPMRITYIQEYEKDANLFFAGFELTVTLKQLEEFFLKWGQVVSVKLSTDENKKS
RGYGWVQYEKKEQANALLADSTDGTIAYNEKTKVIVKRFVKKGQTDREDKRNNLYIKNFW
PSLENYDLDNAEVRESLEKEMREKLNEWFSGYGSIVSILVKIDVERKAPFAFVSFNRHQD
AKEAQRTLGTTQKRDPLSTGRMMYVGWAQTKTDRKQQRDNNVFAKYIYADHLSRNVTEEM
IRTTLKECGYGDIQTIRLEKMQQGFQQIIRIGYIVFDQASDANKLVKNFKENEKFEEIKK
LFDPSVETAGGKYFQHLFPQQSQQRGQRRNNQRQSPNRRMYSMPQGPTPFGQRMPFPPYQ
MQQRMQGPGQMRRPFPQQIPGFTQPIRPNIPPPVQQPEAQKQAPPQAVPFNQRQDLIDLL
ANFETFKAKSQDEQLRQIQQMLYYRIKARLSTDTEAHWKRISEILSDPTNYTTEEIIDMF
KEEEQFNSFIDEAIEQLKEASCW
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggggatttctttttaaaatttaagttctttgtctttgtgcataaataaaatctctgca
aaagcgggaatagcatcaagaaaaaattaaagaaattttaaatcttatttattaaatcgg
attcaaatgttaaggttcccaggatattaggatcaaaacaaacaatcagaaaatggactt
catattgctgacttagaggaaggtatcacagaggaataattatttgtggaattcagaaag
tttggataaatcagctttgtaaaattgcataggtatcctttcattgggaaatcaaagcat
tatgctttcatttatttctcatctcaagaagaggctcgtaaagctaaggaagcaatgaat
tataaataactcttaagagagccaatgcgtatcacttacatctaagaatacgagaaggat
gctaacttattctttgcaggcttcgaattgactgtaacattaaagcaacttgaagaattc
ttcttaaaatggggtcaagttgtcagtgtgaaattgtcaacagatgagaataagaaaagc
cgaggttacggatgggtgtaatatgagaagaaggagtaagctaatgccttgttggctgac
agtacagatggcacaattgcatacaatgagaaaacaaaggtcatagtcaagagatttgtg
aagaaaggacaaacagacagagaagacaagagaaataacctttacattaagaacttctgg
ccatcactcgaaaattatgatttggataacgcagaagttcgtgaatcattggagaaagaa
atgagagaaaaattaaatgagtggttcagtggttatggatccattgtttcaatcctagtc
aaaattgatgtggaaagaaaggctccatttgcattcgttagtttcaatagacatcaagat
gctaaggaagcttaaaggactcttggtacaactcaaaaaagggatccgttgagcactggt
agaatgatgtatgttggatgggcttagaccaagacagatagaaagcaacaaagagacaat
aatgtctttgctaaatatatctatgctgatcatctctcaagaaatgtcactgaagaaatg
atcagaactactctcaaagaatgcggatatggagatattcaaacaattagattagagaaa
atgcaataaggattccaatagatcatcagaattggatacattgtattcgattaagcttct
gatgccaacaaattggttaagaatttcaaggaaaacgagaaatttgaagaaatcaaaaag
ctctttgatccaagtgttgaaactgcaggtggcaaatacttctaacatctcttccctcaa
taatcctaataaagaggacaaagaagaaataatcaaagacaatcccccaatagaaggatg
tattctatgccttaaggtcctacaccatttggttagagaatgccattccctccctatcaa
atgcaataaagaatgcaaggtcctggataaatgagaagaccattcccataacaaatccca
ggattcacttagcctattagaccaaacatccctcctcctgttcaatagcctgaggcccaa
aaacaagctcctcctcaagctgttcccttcaattagagataagatttaatagatttgttg
gctaatttcgaaacattcaaagctaaatcctaagacgaacaactcagacaaattcaacaa
atgctttattacagaattaaggctagacttagtactgacactgaggctcactggaagaga
ataagtgaaatattgtcagacccgacaaattacacaactgaagaaatcattgatatgttc
aaagaagaagaacaattcaactcctttatagatgaagccattgaataattaaaggaagca
tcatgttggtga
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