KEGG   Paramecium tetraurelia: GSPATT00036942001
Entry
GSPATT00036942001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00036942001
Enzymes [BR:ptm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     GSPATT00036942001
Spliceosome [BR:ptm03041]
 Complex C
  Other components
   Complex C specific factors
    GSPATT00036942001
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C Cas3-like_C_2 HA2_C HA2_N Nucleo_LEF-12 wHTH-PRTase_assc DUF4096
Other DBs
NCBI-GeneID: 5021341
NCBI-ProteinID: XP_001435556
Genoscope: GSPATT00036942001
UniProt: A0CBJ2
LinkDB
Position
undetermined
AA seq 589 aa
MGNPLIEGYSVVMLDDIHERTLNTDLLLCLIKKIQKKRPELKVIVSSATMEVELLQNFFP
NSKVIAIRGRNYEVDIMYLLEPCKNYVIAAVEMAYHIHKKMPEGDILVFLTSVEEIHAFI
NLWSHHKANCAVLPLHASLAIDKQLLVFKQHASRKIIVSTNVAESSVTIDGIVYVIDSCY
QKVKVYDYKRNLEQLNVLPISQQSGAQRAGRAGRTRDGICYRLCTKEDYQNLPKTFPPEI
LRSNLTELILQIRSFSLTPNHLQCSNTFLTPVSNEQLINCINILMSLKLIDENFSLTELG
NAIVDYPLETQLAVCVENSFLEEYQCSDEMLKIASILSIQGGIFSSDATPLQMLKAKKAL
GCREGDVLSLHNIFVRYINIGNKGNWCDTYRVSKHKLESAGKIYKQIQKRRKNRQIKSSI
QDVEAVQRCFVSGFFSQVAQRENTAREGVYRNIYTKQLVHLHPASVLTVSYPEWVIYHEL
IEQNNKLTMHNVTELDPHWLFEIAPHFYRDARQEIAEMKHQQEKDQLDKIEAEKQQKQQE
LLMNQESKVVFGSIKQRKPGFKGFGQTQFPIKSKEQRLGSLSFNEEDDF
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgggcaatccattgattgaaggatattcagttgtaatgcttgatgatattcatgaacgt
acattaaatacagatctcttattgtgtttgatcaagaagatccaaaaaaagagaccagaa
ttgaaggtgatagtttcatctgctacgatggaggtagaattactctaaaacttttttccg
aatagcaaagtcattgcaattagagggaggaattacgaagtcgatattatgtatttgctt
gaaccatgtaaaaattatgtgattgctgctgttgaaatggcatatcatattcacaagaag
atgcctgaaggtgatattcttgtatttttaacatctgttgaagaaattcatgcatttatc
aatttatggtcgcatcataaggctaattgtgcagtcttaccacttcatgctagcttggcc
attgataaatagctattagtatttaaatagcatgcaagcagaaaaattatagtatcaaca
aatgtggcagaaagcagtgtcacaatagatggaatagtctatgtgattgattcatgttat
caaaaagtcaaagtttatgattataagagaaatttggaataattaaatgtactaccaata
tcctagcaatctggtgcctagagagcaggcagagctggaagaacaagagatggaatctgt
tatagattatgtactaaggaggattattaaaatttgcctaagaccttccctcctgaaata
ttgagatccaatctcacagaactcattttatagattagatcattctcattgacacccaat
catttgcaatgcagcaatacgtttttgactcctgtttcgaatgaataattaatcaattgt
atcaacattttgatgagcctgaaattaattgatgaaaacttttcattaacagaattggga
aatgccatagttgattatccattagaaacataactagcagtttgtgttgaaaatagcttt
ctagaggaatatcaatgttccgacgagatgctcaaaatagccagtattctcagtatacaa
ggaggcatctttagtagcgatgccacaccattatagatgttgaaggctaagaaggctttg
ggatgtagagaaggagatgtgttatcacttcacaacatttttgttagatatattaacatc
ggaaataaagggaattggtgtgatacatatagggtatcaaaacataagttagaatcagct
ggaaaaatatacaaataaattcagaagagaagaaaaaatagataaattaaaagttccatc
caagatgtagaggctgtttaaaggtgctttgtttctggattcttctcttaagtagcataa
cgagaaaatacagcaagggaaggggtttacaggaatatctacactaaataattggttcat
cttcatcctgcttctgttttaacagtttcataccctgaatgggtaatttatcatgaattg
attgagcaaaataataagttaactatgcacaatgtaacagaacttgatccacattggttg
tttgaaattgcacctcatttctatagggatgccagataggaaattgcagagatgaaacat
caataggagaaggattaattagataagatagaggctgagaagtaataaaagcaataggaa
ttattgatgaattaagaaagcaaagtagtttttgggagcatcaaatagagaaagccagga
tttaagggctttggttagacctaatttcccattaagagtaaggagcagaggctaggatct
ctgtcatttaatgaagaagatgatttttga

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