Paramecium tetraurelia: GSPATT00036942001
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Entry
GSPATT00036942001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ptm
Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptm03041
]
GSPATT00036942001
Enzymes [BR:
ptm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GSPATT00036942001
Spliceosome [BR:
ptm03041
]
Complex C
Other components
Complex C specific factors
GSPATT00036942001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
Cas3-like_C_2
HA2_C
HA2_N
Nucleo_LEF-12
wHTH-PRTase_assc
DUF4096
Motif
Other DBs
NCBI-GeneID:
5021341
NCBI-ProteinID:
XP_001435556
Genoscope:
GSPATT00036942001
UniProt:
A0CBJ2
LinkDB
All DBs
Position
undetermined
AA seq
589 aa
AA seq
DB search
MGNPLIEGYSVVMLDDIHERTLNTDLLLCLIKKIQKKRPELKVIVSSATMEVELLQNFFP
NSKVIAIRGRNYEVDIMYLLEPCKNYVIAAVEMAYHIHKKMPEGDILVFLTSVEEIHAFI
NLWSHHKANCAVLPLHASLAIDKQLLVFKQHASRKIIVSTNVAESSVTIDGIVYVIDSCY
QKVKVYDYKRNLEQLNVLPISQQSGAQRAGRAGRTRDGICYRLCTKEDYQNLPKTFPPEI
LRSNLTELILQIRSFSLTPNHLQCSNTFLTPVSNEQLINCINILMSLKLIDENFSLTELG
NAIVDYPLETQLAVCVENSFLEEYQCSDEMLKIASILSIQGGIFSSDATPLQMLKAKKAL
GCREGDVLSLHNIFVRYINIGNKGNWCDTYRVSKHKLESAGKIYKQIQKRRKNRQIKSSI
QDVEAVQRCFVSGFFSQVAQRENTAREGVYRNIYTKQLVHLHPASVLTVSYPEWVIYHEL
IEQNNKLTMHNVTELDPHWLFEIAPHFYRDARQEIAEMKHQQEKDQLDKIEAEKQQKQQE
LLMNQESKVVFGSIKQRKPGFKGFGQTQFPIKSKEQRLGSLSFNEEDDF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatccattgattgaaggatattcagttgtaatgcttgatgatattcatgaacgt
acattaaatacagatctcttattgtgtttgatcaagaagatccaaaaaaagagaccagaa
ttgaaggtgatagtttcatctgctacgatggaggtagaattactctaaaacttttttccg
aatagcaaagtcattgcaattagagggaggaattacgaagtcgatattatgtatttgctt
gaaccatgtaaaaattatgtgattgctgctgttgaaatggcatatcatattcacaagaag
atgcctgaaggtgatattcttgtatttttaacatctgttgaagaaattcatgcatttatc
aatttatggtcgcatcataaggctaattgtgcagtcttaccacttcatgctagcttggcc
attgataaatagctattagtatttaaatagcatgcaagcagaaaaattatagtatcaaca
aatgtggcagaaagcagtgtcacaatagatggaatagtctatgtgattgattcatgttat
caaaaagtcaaagtttatgattataagagaaatttggaataattaaatgtactaccaata
tcctagcaatctggtgcctagagagcaggcagagctggaagaacaagagatggaatctgt
tatagattatgtactaaggaggattattaaaatttgcctaagaccttccctcctgaaata
ttgagatccaatctcacagaactcattttatagattagatcattctcattgacacccaat
catttgcaatgcagcaatacgtttttgactcctgtttcgaatgaataattaatcaattgt
atcaacattttgatgagcctgaaattaattgatgaaaacttttcattaacagaattggga
aatgccatagttgattatccattagaaacataactagcagtttgtgttgaaaatagcttt
ctagaggaatatcaatgttccgacgagatgctcaaaatagccagtattctcagtatacaa
ggaggcatctttagtagcgatgccacaccattatagatgttgaaggctaagaaggctttg
ggatgtagagaaggagatgtgttatcacttcacaacatttttgttagatatattaacatc
ggaaataaagggaattggtgtgatacatatagggtatcaaaacataagttagaatcagct
ggaaaaatatacaaataaattcagaagagaagaaaaaatagataaattaaaagttccatc
caagatgtagaggctgtttaaaggtgctttgtttctggattcttctcttaagtagcataa
cgagaaaatacagcaagggaaggggtttacaggaatatctacactaaataattggttcat
cttcatcctgcttctgttttaacagtttcataccctgaatgggtaatttatcatgaattg
attgagcaaaataataagttaactatgcacaatgtaacagaacttgatccacattggttg
tttgaaattgcacctcatttctatagggatgccagataggaaattgcagagatgaaacat
caataggagaaggattaattagataagatagaggctgagaagtaataaaagcaataggaa
ttattgatgaattaagaaagcaaagtagtttttgggagcatcaaatagagaaagccagga
tttaagggctttggttagacctaatttcccattaagagtaaggagcagaggctaggatct
ctgtcatttaatgaagaagatgatttttga
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