Paramecium tetraurelia: GSPATT00037271001
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Entry
GSPATT00037271001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ptm
Paramecium tetraurelia
Pathway
ptm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GSPATT00037271001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptm04131
]
GSPATT00037271001
Membrane trafficking [BR:
ptm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GSPATT00037271001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR3_1st
N_Asn_amidohyd
DUF5917
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
CH
Motif
Other DBs
NCBI-GeneID:
5021668
NCBI-ProteinID:
XP_001435883
Genoscope:
GSPATT00037271001
UniProt:
A0CCG9
LinkDB
All DBs
Position
undetermined
AA seq
1167 aa
AA seq
DB search
MINLSQILEGDNGEITFCEDASQVDLEDILQEDDEMREQLNHLNSDSQTLECNNQNNESF
ICDQEEFISPIQIMTLGHQSKTFGISTNYLINYWEPQLALFSNNKNCKTIQIQDVSYISV
KGQIIAVGFETGLIHIYEGSQLKLLYKIQEHQTTIIGLNIVDVQANEVVIASSDLDGNVK
LIRVGQNLFRSKIVTNTILNKFEYPVTQLISQQFKYSDTDKTSLLLTLANSNMVITLSIN
PEVRVVHVFDKQKSNNDLHWGKCHHEGNQIQLLSIQWNSFIQLITFLENSPWYFSFYSAD
TPLIGAKFISENLILAATEGQFQVLYIPYFSKGKYCFKSDSKAKISNTHFHQNIYCLRVI
SNVVYFISENKLYSLHALSWLQYLKSLIQNDTPQWSVALKFLIQVYRGKVKGMPNLELDE
DRSAIQTLAPTLITSITNSKMNRELISAVVQFILLCQIPQHLIIVRQGCEKQQILDDYYR
VLELHLKKITQLPKEIFFDLANKFSPESFQQLVINLDLNSIDIGYTYDVCLSKEIYTPLL
YICPRKEEDFLTPLNKMFEKHKQELYEKCLWFIEITQKQILFPNDQIPLEIWKKAVRQQM
LWLMEVLDVFQSDKLFQILTTYLKQPCFGALHHESVYSYFNITQENLLATKIFEQVSSIK
QQYLLQYLLFISKIIDQIKVKDSEKLLLQIFEINKSYIDNYVAMPEDLDQILQMIYYLMP
HTSLIEQAYESKCVDYIAYYFLSQNQFNEAIKIFFDYEEFKLRVYKWLEYQSYDPLMLDH
LDKLLELDPEKCAKVFQSWPIETLQKLIIYQPKKELLHVFKYLSIDLSPFLQLKLIELIS
IHEPENTIPWLKNRQYQLEDVEQIFHQTNNIEGLGYIMEQKGLYQQAIDNYLQVYKEESR
NYILSFRNQDRVSQLFQNLMRATKIAVQSDDYHQDLYLYIAHQIFNPSMHQTHWCKLKRS
FVFNQQFSQLFMNLFRYSPTELIKIIEINHETFNQVHLKSSFITVFKEFGYEKQLVEKIS
KIIRNDNIKLLKLLYSLMNKSNLYEIICYSAKVWSHNASILPGKQILSDLLKYLNLIMYP
YEYKFIVLESIGVEELKKSILKSKVDNQQLQLLKNVDDIDFEDNFISSTTQDDKEMMELR
LLNKMDIYDQLIDSGLQQYNSFLEQYY
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttaagttaaatactagaaggagacaatggagagatcacgttttgtgaggat
gccagtcaagtcgatttggaagatattctccaagaggatgacgagatgagagaacaactc
aatcatttgaatagcgattcccagactctggaatgcaataatcagaacaatgaatcattc
atttgcgatcaagaggaattcatttccccaattcaaattatgactctgggacaccaatcc
aaaacctttggcatctcaacgaattatctgatcaattattgggaaccctagcttgcattg
ttttccaataacaagaattgcaaaaccattcaaatttaggatgtatcatacatttcagtc
aagggacaaattatagctgtcggatttgagactggcctaattcacatctatgaaggaagt
caattaaaattgttatataaaatacaagaacatcaaaccacaataataggtttgaatata
gtcgatgtgcaagccaatgaagtagtgattgcatcgtcggatctggatggcaatgtcaaa
ttgattagagtcggtcagaacttattcagaagtaaaattgtaaccaataccatattgaat
aagtttgagtacccagtcacctaactaatatcatagcaattcaaatactcagataccgat
aaaaccagtttattattaactctggcaaacagcaacatggttataacactctccatcaat
cctgaagtgagggtagtacatgtttttgataaacagaaatcaaacaatgacctccattgg
ggtaaatgccatcatgaaggcaatcaaatataattgctatccatccaatggaactcattt
atttaattgatcaccttcttggaaaattccccatggtatttttcattctattctgctgat
actcctctaatcggagctaaattcatctccgaaaacctaatccttgctgccaccgaaggg
taatttcaagtcctttacataccttatttctcaaaaggcaaatattgttttaaatctgac
agcaaggctaagatttctaacacccacttccatcaaaacatatattgtctaagagtaata
agcaatgtagtctacttcatatcagaaaataagttgtattcattgcacgcattgagttgg
ttacaatatctgaaatcgctaatacaaaatgatactccacaatggtcagtggcattgaaa
tttcttatccaagtctacagaggcaaggttaaaggcatgcccaatctggaattggatgaa
gatagaagtgcaatccaaactttggctcctactctaattactagtattactaattcgaag
atgaatagagagttgatatcagcagtcgtgtagtttattcttctttgttaaatcccgtag
catttaattatcgtaagataaggatgtgagaaataatagattttggatgactattacaga
gtgttagaactacatctaaagaagatcacttaattgcccaaagaaatattctttgatttg
gcaaacaaattctctcctgagtcattccaataattggtaatcaatttggatttaaattca
attgatatcggatatacatacgatgtctgtctgagtaaagagatttacactccattattg
tacatttgtccaagaaaagaggaagattttctaacgcccttgaataaaatgttcgagaaa
cataaataggaactatatgaaaaatgtttatggtttatagaaatcacatagaagtaaatt
ctgtttcctaacgatcagataccattggaaatttggaagaaagctgttagataatagatg
ttgtggttgatggaagtgttagacgtgttctaaagtgacaaattgttccaaatcctaacc
acttatcttaaataaccttgttttggtgcattgcatcatgaatcagtgtactcttatttc
aacatcacttaagagaacttattggcaaccaagatctttgaataagtaagcagcatcaaa
taatagtatttactttaatatctattgtttatcagtaagataattgattagatcaaagtc
aaagactcagagaaattattattacagatctttgaaattaataaatcatatattgataac
tatgtagccatgcctgaagatttagatcagatcttacaaatgatttattatttgatgcct
cacacctcattaatcgagtaggcatacgaaagcaagtgtgttgattatattgcttattac
ttcttatcccaaaatcagttcaacgaagccatcaaaatattctttgattatgaagaattc
aaacttcgagtctacaaatggcttgaataccaatcctatgatccgttgatgttggatcat
ctggataagctacttgaattagatcctgagaagtgtgctaaagtctttcaaagttggcct
attgagaccttacaaaaactcatcatttatcaaccaaaaaaggaattgttgcacgtattc
aaatatctgtccattgatctttcgccatttctccaattgaaattgattgaattgattagt
atacatgaacctgaaaacaccattccatggttgaagaacagataatactaattggaagac
gtcgaacaaattttccattaaaccaacaatatcgaaggattgggatacattatggaataa
aaaggactctatcaataggctattgataactacctttaagtctataaagaggaatctagg
aattacattttgtcatttaggaactaagatcgagtatcctaattgttccagaaccttatg
agagcaactaagattgctgtctaatctgatgattatcactaagatttgtacttgtatata
gcacatcaaatcttcaatccttcgatgcattaaactcattggtgtaaactcaagcgatcc
tttgttttcaatcagcaatttagttagctctttatgaatttattccgttactctcctaca
gaattaattaaaatcatagagataaatcatgagacattcaaccaagttcatttgaagagt
agttttattacagtttttaaggaatttggatatgaaaaacaattagttgaaaagatatct
aagataattagaaatgataacatcaaattgcttaagttactgtattctttgatgaacaag
tcaaatctatatgaaataatatgctattctgctaaagtgtggtcacacaatgcatccatt
ttgcctggaaaacaaatattgtccgatttgttaaaatatctcaacttaatcatgtaccct
tatgaatataaatttatagtgcttgaaagtattggagtagaagaattaaagaaatctatc
ttaaagtctaaagtagacaattaatagttgcaattgttgaagaatgtcgatgacatcgat
tttgaagataatttcatttcatcaaccacttaagatgacaaagaaatgatggaattgagg
ttgctaaataaaatggatatatatgactagttaattgattctggattgcaatagtacaat
tcatttctggaataatattattga
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integrated database retrieval system
