KEGG   Paramecium tetraurelia: GSPATT00038197001
Entry
GSPATT00038197001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptm03041]
    GSPATT00038197001
Spliceosome [BR:ptm03041]
 Complex B
  Other components
   Complex B specific factors
    GSPATT00038197001
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML LisH_TPL Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 LisH_WDR26 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 LisH Beta-prop_LRRK2 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 5022935
NCBI-ProteinID: XP_001437150
Genoscope: GSPATT00038197001
UniProt: A0CG36
LinkDB
Position
undetermined
AA seq 483 aa
MEINRNDVIKLILQFLQENGFKKSQEELQKESGICLNLVDSKQNLKKDIIDGKWDQVLNQ
IKLFNFTGDTLLDLYELIVQELVEVNETQSAHQFFLQMIVPSLQEYKERLLKLDYLIRKP
GKLSMNEIYNDNLSKEQRRSKVADRVISECIEAPACRLLELIGDSLRHLNANKIITNNKY
DLFMGLGQSEQKVTQISRIEKVIKYSEKMRVNCATFTPDGQNLITGSIDGIIEVWDPTKY
SVRNDIEYQVNDQYMMHNNCIINLSANNELLVSLDNNGQVKVWKLKTGKCLKIIESTHPK
QIASVLLGKDPQQIFIASDYIQLFALKSGITQKQYRGHSGLIQSMFQSSEGSRIYSGALD
QYFKVWDTHSGEQIYSLKLETALEKIFYIQGSVLLCPRGKQMVLLNSNFQEVKRYHSESE
LISCVAQGDFAYGLGQGQLYSYEVKSGIGLKLLKLPSENMQDICIGQNVIFCYSQNGHLI
FIQ
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggaaataaatagaaacgatgtgataaagttgattttataatttttacaggagaatgga
ttcaaaaaatcgcaagaggaattgcaaaaagaaagtggaatctgtttaaatttggttgat
tcgaaataaaatcttaagaaagacatcatagatggaaaatgggactaagtgctgaattag
attaagttgttcaattttacgggtgatacattattagatctttacgaattgatagtctaa
gagttagtggaagtaaatgagacacaatcagcgcattaattttttcttcaaatgattgtt
ccaagtctgcaggaatacaaagagagactcctaaaattggattacttaataagaaaacct
ggtaaattgagtatgaatgagatttacaatgataatttgagtaaggaataaagaagaagc
aaggtggctgatagagtgattagtgaatgcatagaggctccggcttgtagattgttggaa
ttgattggtgatagtttaagacatttaaatgcgaataaaataatcacgaataacaaatat
gacttatttatgggtttaggatagtcagagcaaaaagtgactcaaattagtagaatagag
aaggtaattaaatattcagagaagatgagagttaattgtgcgacatttactcctgatgga
caaaaccttattacaggatctatagatggaattattgaggtttgggatcccactaaatac
tcagtcagaaatgatatagaatattaagtgaacgatcaatatatgatgcataataattgc
ataattaatttaagtgctaataatgaattgctagttagtttggataataatggataagta
aaagtttggaaattgaagactggtaagtgtctaaagataattgaaagtacacatcctaaa
taaattgcaagtgtgttattaggtaaggatccttaatagatcttcattgcatctgattac
atctaattattcgcacttaagagtggaatcacttagaaatagtataggggacatagtgga
ttgatttaatcaatgttctagagttcagaaggttccagaatatacagtggtgctttggat
caatattttaaagtgtgggatactcattctggagaatagatttacagtctgaaattagag
acagcattggagaagatattttacattcaaggatctgttctgttatgcccaagaggaaaa
taaatggttttattgaatagcaatttctaagaggttaagagatatcattctgaatctgaa
ttgattagttgcgtggcttaaggtgattttgcttatggtttaggataggggtaattatat
agttatgaggttaaatcaggaattgggttgaaactacttaaattgccaagtgagaatatg
caagatatatgcataggacagaatgtaatattttgctattcacagaatggtcatctaata
tttatacaatga

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