KEGG   Paramecium tetraurelia: GSPATT00039078001
Entry
GSPATT00039078001 CDS       T01055                                 
Name
(RefSeq) hypothetical protein
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ptm04812]
    GSPATT00039078001
Cytoskeleton proteins [BR:ptm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     GSPATT00039078001
SSDB
Motif
Pfam: Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 eIF2A Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F Ge1_WD40 Beta-prop_SPT8 WD_LRWD1 Beta-prop_SCAP Beta-prop_VPS8 PROPPIN DUF2491 DUF7787
Other DBs
NCBI-GeneID: 5028921
NCBI-ProteinID: XP_001443137
Genoscope: GSPATT00039078001
UniProt: A0CY73
LinkDB
Position
undetermined
AA seq 636 aa
MNRNLKLGNNIKFSVGEIENLSKIKLARFSETATRFFTYVDDTNQIYINKIENSKNFLDV
KLFNPFHQYFVQSQNEISSIIFSSSENEIINGSSKGIITFVDISTQKIQSNIKGHLSSIT
ALAIFPNQENMVFSGAMDSQVKLWDSRSKTAGFTLRAHTLSISTLAVSPDGKLLASGSND
GSVKIWDIHQQKLMATFNESDSSITCLQFNPLDKAIATASDDGCIRYWDLDKYNQISSTK
PDKQTVYSIRFCNEGKSLISAQNFSFKCWDLERDALLLDNVESQCKSILDTYIFEDRELF
GLSTQNQTGLSVFGSKLSNINFDSRFSMDRNKQRIHSERIQGTEINDQFQQRNSVNILKP
KNSQKIFQNNLNQKASNQNLIEEQGYQICNNNGNKFVPTTQIPQMIAYESVIQEEDVKEN
QQSVLDLVTSQDEVNLSSFVIDDENKLKFIQIDMINEIQKDHNRVMQILKQRINYMKPIM
YWWSNNNIKSAINAINQLVEPSILFDALTMCSQSSRFKSIPIEQMPQMLEKCKVLIDSKY
LSHIKGGIVFSYKAFNIYRDKQDIITIKCFNQMSKVDLSREERVAKYDKIVEQLKQIIQM
SKLTKLIERNKEEISDLAKKFQIEMLGLLKRINQQQ
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaatagaaacttgaaattgggtaacaatattaaatttagtgtaggtgaaatcgagaat
ctatcaaaaataaaattagctcgtttttcagagaccgccactagattcttcacatatgtc
gatgacacaaattagatatacattaataagatagaaaattcaaaaaatttcttagatgtt
aaattattcaacccattccattagtactttgtttaaagtcagaatgaaatctcaagtatc
atctttagcagttctgaaaatgaaatcataaatggatcaagcaaaggaattattacattt
gtcgatatatcaacttaaaagatttaatcaaatattaaaggtcatttatcatctataact
gccttagcaatatttccaaatcaagaaaatatggtgtttagtggagcaatggatagttaa
gtaaaactttgggattctagatctaaaacagctggattcacattaagagcgcacacctta
tcaattagcacattagctgtttctcctgatggtaaattattagcatccggttcgaatgat
ggaagcgttaaaatttgggatattcattaatagaaattgatggccacctttaatgaatcc
gattcatccataacatgtttataattcaatcctcttgataaagcaatagctacagcttca
gacgatggatgcataagatattgggatttagataaatataattaaatatcctcaaccaag
ccagataaatagacagtttattcgattagattttgtaatgaaggcaaatccttaatatca
gcataaaatttttcttttaaatgttgggatttagaaagagatgctttgttactagataat
gttgaaagtcaatgcaagagcatattggatacatatatatttgaggacagagaattattt
ggactatcaactcagaattagacaggtttaagtgtatttggatcaaaattatcaaatata
aattttgatagtagattcagtatggatagaaacaaatagagaatacatagtgaaagaata
taaggtacagagataaatgatcaatttcaatagagaaatagtgtcaatattttgaagccg
aaaaattcttaaaaaatatttcaaaataatttgaatcaaaaagcttccaattagaatctt
attgaagaataaggatattaaatatgtaataataatggaaataagtttgtacctactacg
taaattccctaaatgattgcttatgaaagtgtaatttaagaggaagacgttaaagaaaac
taataaagtgtgctagatttagttacaagttaagacgaagttaatttatcaagcttcgtt
attgatgatgagaacaaattgaaatttatttaaatagatatgattaacgaaatatagaag
gatcacaatagagttatgtaaatattaaaataaaggataaattacatgaagcctataatg
tattggtggagcaataacaacataaaatcggccatcaatgcaattaatcaattagttgaa
ccatcaatattatttgatgccttgacaatgtgttcacaaagttcaaggtttaaatctata
ccaattgagtaaatgccttaaatgttagagaagtgtaaagttctaatagattcaaaatac
ttatctcatataaagggaggcattgtgttctcatataaggcattcaatatttatagagat
aaataggatattataacaataaaatgtttcaattagatgtcgaaagtggatttaagtaga
gaggaaagagttgctaaatatgacaaaatagtggaataattaaagtaaataatttaaatg
tcaaaattaacaaaattgatagaaagaaacaaggaagaaattagtgatttagctaaaaaa
ttttaaatagaaatgttaggcttgttaaaaagaattaattaataataatga

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