KEGG   Paramecium tetraurelia: PTMB.199
Entry
PTMB.199          CDS       T01055                                 
Name
(RefSeq) Conserved WD40 and TPR repeat-containing protein
  KO
K19672  intraflagellar transport protein 140
Organism
ptm  Paramecium tetraurelia
Brite
KEGG Orthology (KO) [BR:ptm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ptm03037]
    PTMB.199
Cilium and associated proteins [BR:ptm03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   PTMB.199
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st TPR_IF140_C Beta-prop_IFT140_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_EML TPR_GEMI5 Beta-prop_WDR19_1st WD40_WDHD1_1st TPR_IFT80_172 Beta-prop_WDR75_1st WDR55 EIF3I WD40_Prp19 TPR_2 ANAPC4_WD40 WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N ANAPC3 TPR_12 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_TEP1_2nd PPR_2 TPR_COPA_B TPR_1
Other DBs
NCBI-GeneID: 2898474
NCBI-ProteinID: XP_001347023
UniProt: Q6BG24
LinkDB
Position
MT
AA seq 1360 aa
MSILSEHTISIKSETITMMSVSHSAISPSIAICTISRVMLYNDQGEKFDYELARNQKPTA
IAWHPIQPQLSIGWQNGTITIWQEDTRTAKEESAVHKEEINLIQYNTNGSRMVSADISGL
VVVWRGITPMSTYQKEGIMTICIFADLNNIIKAQNLFFFGGKSGLVCLADDSKHCSEVCK
VVGSIKCLMIYEKYNSVIIITSGLLLVQFKISTSEKTQPDKKVKLSIAGEPESLQSVWIG
QCLIAISSNENMIRMFQLEADENYVITLHEFQEQYPNEKILNDKITCVQYSKKSKNLVAG
TKDGRLVFWKNYALTDESPVESEQWKALKIITLNKTVNEIAIGKNSGVIAARSADSVRIV
QESLVHGKIYENVRVLQVEHNKILIYFKNDSQNQDKEKGPWSMFLWDSKFPIKSIDCSQQ
HLLVQSANKIEISEFTNNSQILAKSSFDRKCVKAALFQEDLILFYEYKFEVTNFKGVQKY
FVDFSESDGIIANYEFNNKTMVIWTHNNYFRLYDFSRREAQLSGFNCKFENDKGPLGTIK
QCAVNCDGSNVAIIADNHGNQNDLFFVYNPENNNFQSFELPQYRKATQIMWDYSDPRFFG
VTTICTKIKTNSENDVEEEQADFRAKKFFTFFFNPQTGIKEQDCYVLDEKQEGVLSIRIP
HINVIQKKEQSYRIQDILMNDFTGLERADEPTKRAVINFSYHLSCGNLDEAYKSVKAIQN
PTVWEKMAQMSVKTRRLDVAEICIGNMRFARGAKAIRETKKEPEFEAQLAMVAIQLNMIS
EAEKLYYQCKRYDLLNKLYQAQGQWEKALEIAEKHDRINLLSTYYKLAKQYEISKEWDKA
IQYYEKSGNAQKEIPRMFYEADELQYLEGYVLQKKDPVLYKWWGNHLESQEQYEEAMKFY
RDSNDALGIVRVLLHQDNVRHAKETCNDKNDPAAHYFLAKYLEAKNIIPEAIQYYTKAQY
YSEAIRLAKEANLISDVTAISLQAPKLIMIQSAIYFEQKKIIDKAVLLYMRGGQLQKALQ
LAQKEKLTDYVKKINQEIALQKQETVDLTFTNTGSLKEAPSQQKLGNQQQPQQQSTQSRD
KAPPPGSLQDLINKKQFEKVLEMCDSQGLQITDDLVKQMLDGLDDKRKKEVQLLIAEKSK
KMGNFEQASKMYIQMGERVKAMKALCKLGDVEKIIAFANNARMAEIYILAGNYLQTGDWH
KTPELMKHIIQFYSKAKAFDHLANFFEACSSVEIDEYRDYDKACAALKEAIKYSDKSTNQ
QKTQQLQQKLKLINDFVQAKQKSPQEMLQLYYKLLNDSNIEYAVRQGDIFAELIEYYYAQ
GQYEKAYEEMQKMQKKSIVLNPYLDQELVQILLNFRYKKL
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgtcaattttgagtgaacatacgatatcaataaaaagtgaaaccataacaatgatgtcg
gtttcacatagtgctataagtccatctatagcgatctgtacaatatctagagtgatgctg
tataatgattaaggagagaaatttgattatgaattggctcgtaattagaaaccgactgca
atagcatggcatcctattcagccacaattgtctatagggtggtagaatggcacaataaca
atatggtaagaggatacacgtactgccaaggaggaatcagctgtgcataaagaagaaatt
aatttaatacaatataacaccaatggatctagaatggtcagtgcagatatatcgggtctg
gtagtcgtatggagaggaataacgccaatgagtacataccaaaaagaaggtataatgaca
atttgcatatttgctgatttaaataatatcatcaaggcttaaaatttattcttttttggt
gggaagtcaggattggtatgtttggctgatgatagtaaacattgttcagaagtctgtaaa
gtcgtgggtagtattaaatgcttgatgatatacgagaaatataattcagttatcattatc
acaagtggtttgcttttagtttaatttaaaatcagtacaagtgagaagacatagccagac
aaaaaggttaaattatcaatagcaggagagccagaatcattgtaatctgtttggattgga
taatgtttaatagcaatttcatcaaatgaaaatatgattagaatgttttagttggaagca
gatgaaaattatgttatcactctgcatgagttttaagaataatatcctaatgaaaagata
ttaaatgataagattacctgtgttcaatacagcaagaaatcaaagaatttagtagctgga
actaaagatggcaggttggtattttggaaaaactatgcattgacagatgaatctccagtt
gaaagtgagtagtggaaggcattaaaaataattacccttaataaaacagtcaatgaaatt
gctattggtaagaacagtggagttattgctgcaagatcagcagattccgttagaatagtt
caagaatctttggttcatggcaaaatatacgagaatgttagagtattgtaagtagaacat
aataaaatcttaatctattttaaaaatgactcttaaaatcaggacaaagagaaaggacct
tggtcaatgtttttatgggatagcaaatttcctattaagtcaattgattgttctcagtaa
catcttttggtttagagtgcaaataagattgagataagtgaatttacaaataattcttaa
attctagctaaatcgtcatttgataggaaatgtgtgaaggctgctctattttaagaagat
cttatattattttatgaatacaaatttgaagtaacaaactttaaaggagtttaaaaatac
tttgttgatttctcagagagtgatggaatcatagctaattatgaattcaacaataaaaca
atggtcatttggacacataacaattattttagattatatgattttagtagaagagaagct
caactttcaggatttaattgcaagtttgaaaatgacaagggtcctttaggtacaattaaa
taatgtgctgtcaattgtgatggatccaatgtggctataatagcagataatcatggaaat
caaaatgacttattttttgtttataatccagagaacaacaacttttaatcatttgaatta
ccataatacagaaaagctacttaaataatgtgggactattcagatccaaggttctttgga
gttactactatctgcactaaaattaaaacaaatagtgaaaacgatgttgaagaggaatag
gctgatttcagagctaagaagtttttcactttctttttcaatccatagacaggaatcaaa
gaataagattgttatgtacttgatgaaaaacaagaaggagtactgtctattcgtattcca
catattaatgtaattcagaaaaaagaacaatcatatagaatttaagatatcctcatgaat
gatttcactggcttagaaagagcggatgaaccaaccaaaagagctgtcattaatttctcc
tatcatttatcttgtggtaatttggatgaggcctataaatctgtaaaggctattcaaaat
ccaacagtctgggaaaaaatggcttagatgagtgtcaaaaccagaagattggatgtcgct
gaaatttgtataggaaacatgagattcgctagaggtgctaaggcaattagagaaacaaag
aaggaacctgaatttgaagcttaattagctatggttgctattcaattaaatatgatctct
gaagctgaaaaactatattattaatgcaagagatatgatttactcaataaattgtattag
gcataaggataatgggaaaaggcattggaaatcgcagagaaacacgacagaatcaatctc
ttatcaacgtattacaaattggctaaacaatatgaaatttccaaggagtgggataaggca
atccaatattatgaaaagtcaggtaatgcacaaaaagaaatacctagaatgttttatgag
gctgatgaattataatatttggaaggctacgtcctataaaagaaagacccagtgctttat
aaatggtggggtaatcatctagagtcataggaacaatacgaagaagcaatgaagttctat
agagattcaaatgatgccttgggtattgtcagagtgttattacaccaagataatgtgaga
catgccaaagagacttgtaatgataagaatgatccagcagcacattacttcttagccaaa
tatctagaagccaagaacattatccctgaggccatttaatattatacaaaggcttaatac
tatagtgaagccattagattggcaaaggaggccaatttaatttcggatgttactgctatt
tcattgtaagcaccaaagttgattatgattcaatcagctatatatttcgaataaaagaaa
attattgataaagcagttttactttacatgagaggaggacaattacaaaaagcgttgtag
ttggctcaaaaagaaaaattgacagattatgtgaagaagatcaattaagaaattgcactt
taaaaataggaaacggtagacctaacctttactaatactggttcattgaaggaagctcca
tcacaataaaaattaggtaatcaataatagccataataataatctacttaatcaagggat
aaggcaccacctccaggatcattacaagatttaatcaataaaaaatagtttgaaaaagtc
ttagaaatgtgtgatagttaaggtttatagataactgatgatttggttaaacaaatgtta
gatggtctagatgacaaaagaaagaaggaagtttaattgcttattgctgagaaatcaaag
aaaatgggcaatttcgaacaagcctctaaaatgtatatacagatgggagaaagagttaaa
gccatgaaggctctttgcaaattgggtgatgttgaaaaaataattgcctttgctaataat
gctagaatggctgaaatctatattctggctggtaattatctttaaactggtgactggcat
aaaacacctgaattgatgaaacacattatacaattctatagtaaagccaaagcatttgat
catttggctaatttctttgaagcatgctcttcagtcgaaatcgatgaatatagagattac
gataaggcttgtgctgctttaaaagaagccatcaaatattcagataaatcaacaaaccaa
tagaaaacataataattgtaatagaaattaaaattaatcaatgattttgttcaagccaaa
tagaagtctccataagaaatgttataactctactataagttattaaatgatagtaacatc
gaatatgcagtgagataaggagatatctttgctgaattaatcgaatactattatgctcaa
gggcaatatgaaaaggcttatgaggaaatgcagaaaatgcagaagaaatccattgtactc
aatccttatttagattaagaattagtataaattttacttaattttagatacaaaaagtta
tga

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