Paramecium tetraurelia: PTMB.309c
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Entry
PTMB.309c CDS
T01055
Name
(RefSeq) Cysteine protease required for autophagy-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ptm
Paramecium tetraurelia
Pathway
ptm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
PTMB.309c
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptm01002
]
PTMB.309c
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptm04131
]
PTMB.309c
03029 Mitochondrial biogenesis [BR:
ptm03029
]
PTMB.309c
Peptidases and inhibitors [BR:
ptm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
PTMB.309c
Membrane trafficking [BR:
ptm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
PTMB.309c
Mitochondrial biogenesis [BR:
ptm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
PTMB.309c
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
2898348
NCBI-ProteinID:
XP_001347134
UniProt:
Q6BFR3
LinkDB
All DBs
Position
MT
AA seq
277 aa
AA seq
DB search
MYIFGQEIQNVDSFLQLKETFIWFSYRANIQYEGRAISDQGWGCLIRVGQMIVANSLIRE
STNSKPNDLKTKIICLFDDNQCFSTLAPFSIQQIIKRADLVYNIKIGDWYTGPKIMCLLE
DLLQSAKTIKQLKIINFLEQCVIEKQIDLQFKQPQLLIIHAIIGNKELDQYFVAELQKHM
QIPQFAGAIVGKSKKAYFLIGYQNNQGIVMDPHYVQESNLLQLNSQLKCIPLKEFSGTIA
LCYYISNSYDYQQLKTNLKDLKGSIFSIIDETCTCFF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtatatttttggttaggaaatacagaatgtcgattccttccttcagttaaaagagact
ttcatttggtttagttacagagccaacattcagtatgaaggaagggccatatctgatcaa
gggtgggggtgtttaataagagttggttaaatgatagtggctaattcattgattagagaa
agcactaattcaaaacctaatgatctcaaaactaaaataatctgcttgtttgatgataat
caatgtttttccactctagctcccttttccatccaataaataatcaaaagggctgatcta
gtctataatataaaaattggagattggtatactggtcccaagatcatgtgtttattggaa
gatctccttcaaagtgctaagaccattaaacaattaaagatcatcaactttttggaacag
tgtgtaatcgaaaagcaaatagatttataatttaaacaacctcaactattaatcatccat
gctataataggaaataaggaattagatcagtactttgtcgctgaactttaaaagcatatg
cagattccttaatttgcaggggcaatagttggcaaaagcaaaaaagcctatttcctcata
ggatactagaataattaaggaatcgtcatggatccccattatgtctaagaaagcaactta
ttataattaaattcttaattgaaatgtattccattaaaggaattttcgggtacaattgca
ctatgctactatatttcaaatagttatgattatcaataattaaagacaaacttgaaagat
ctcaaagggtctatcttcagtataatagatgaaacttgcacatgttttttttga
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integrated database retrieval system
