Pseudoalteromonas translucida KMM 520: PTRA_a0582
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Entry
PTRA_a0582 CDS
T04220
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03410
Base excision repair
ptn03430
Mismatch repair
ptn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PTRA_a0582 (recJ)
03430 Mismatch repair
PTRA_a0582 (recJ)
03440 Homologous recombination
PTRA_a0582 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a0582 (recJ)
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PTRA_a0582 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PTRA_a0582 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PTRA_a0582 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
ALS31926
UniProt:
A0A0U2LKM0
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All DBs
Position
I:571344..573065
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AA seq
573 aa
AA seq
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MKKTIQTRENVDDSHLPSHLHPVIKQIYATRNVSHADELNNSAATLHDFKLFKDMDKACD
LLIEALHAQSHILIVGDFDADGATSTATLMQGLAMLGFAHLDYLVPDRFSLGYGLSPALA
AQIVQLKPDLVITVDNGISCIAGIDIVKAANIKVLVTDHHLQGETLPNADAIVNPNRHDC
SFPSKSIAGVGVAFYLLIALRSTLREQNHFAQQPMPNLADLLDIVALGTVADVVALDANN
RTLVHQGLARIRSGKTRPGITALIEVANRNASRLSASDFGFSLAPRLNAAGRLDDMSLGI
ACLLSTDINQARRIASELDSLNFARREIEQGMQHEAQAVLDKLAFNDDNIPDAICLYQED
WHQGVIGILAGRLKEKYHRPTVIFAGGENGEIKGSCRSIEGLHIRDLLEGLSTADPHLIS
KFGGHAMAAGLSINEQQFSEFKHAFDTAVSAQLSEESKRCIVFTDGELPNECFTMDFAQQ
LKQAGPWGQQFPEPVFEHTFELIQQRIVGEKHLKLVLKHQSGRLVDAIAFGIDVKEWPDN
NAQFVKAAYQLDINEFRGKFTLQLIIRELEKAS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgatccaaacgcgcgaaaacgtcgatgattcacatttaccgagtcattta
caccctgtaattaagcaaatttatgccacgcgaaatgtttcccatgccgatgagctaaat
aacagcgccgccacattacacgactttaagttatttaaagatatggacaaagcctgcgac
ttgttaattgaggcgctacatgcccaaagccatattttaattgttggcgattttgatgcc
gatggtgcaaccagtactgccacattaatgcaaggcttggcgatgcttggctttgctcat
ttagattacttagtacctgatcggtttagcttaggctatggcttaagcccggcgttagct
gcgcaaatagtacaacttaaacccgatttagtaattacagttgataacggtatttcctgt
attgcgggtattgatattgtaaaagccgccaatattaaagtgctggttaccgaccatcac
ctacagggcgaaacactccctaatgccgatgccatagtaaacccgaacaggcacgactgc
agctttccgtctaaatcgattgccggtgttggtgtggctttttacttacttattgccctt
agaagcaccctgcgtgagcaaaatcattttgcgcagcagcctatgcctaacttagccgac
ctgctcgacatagttgcgcttggcactgtagccgatgtagtggcgcttgatgccaataac
cgtactttggtacaccaagggcttgcgcgtattcgcagtggtaaaactcgcccaggcatt
actgccctcattgaggttgctaatcgcaacgcctcaagattgagtgccagcgactttggt
ttttcgcttgctccgcgcttaaatgccgcagggcgcttagatgacatgagtttaggcata
gcctgcttactcagtaccgatataaaccaagccagacgcattgccagtgaactagatagc
ttaaactttgcacgccgcgaaatagagcaaggcatgcagcatgaagcgcaagctgtgctt
gataagttagcattcaatgatgacaatattcccgacgctatttgtttataccaagaggat
tggcatcaaggtgttattggtattttagccgggcgtttaaaagaaaagtatcaccgcccg
accgttatatttgcgggtggcgaaaacggtgagataaaagggtcatgccgctcaattgaa
gggctacacatacgcgatttactcgaagggctaagtaccgccgatccgcacttaattagt
aagtttggtggccatgccatggcggccggtttaagtattaacgagcagcagtttagcgaa
tttaaacacgcctttgatactgccgttagcgcccagcttagtgaagaaagtaaacgctgc
attgtatttaccgatggtgagctgccaaatgagtgttttaccatggattttgcccagcaa
ttaaaacaagcaggcccttggggacagcaatttcctgaaccggtatttgagcacacattt
gagttgattcagcagcgtatagtgggcgaaaagcatttgaaattggtattaaagcatcaa
tcaggacgcttagttgatgccattgcttttggcattgatgtaaaagaatggccagataac
aacgcacaatttgttaaagcagcgtatcagctcgatataaatgagtttagaggcaagttc
accctgcaattaattatccgagagctagaaaaagccagctaa
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