Pseudoalteromonas translucida KMM 520: PTRA_a0724
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Entry
PTRA_a0724 CDS
T04220
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTRA_a0724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptn03019
]
PTRA_a0724
Enzymes [BR:
ptn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTRA_a0724
Messenger RNA biogenesis [BR:
ptn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PTRA_a0724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ALS32047
UniProt:
A0A0U2IS47
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All DBs
Position
I:701918..703216
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AA seq
432 aa
AA seq
DB search
MSECEYNSALCHFKAKPMSATTFSSLNLDPLLLTAIEQNNYTQPTAIQIKTIPPILAGSD
VMGSAQTGTGKTAAFVLPLLHKLLNTPKKDELGVARVVILTPTRELAQQVFASFEKYAQG
TNIKGALAYGGASIGPQIKALKDAQVIVATPGRLLDHIVKGSVVLSSVDSLVFDEADRML
DMGFIDEIKRILRHIPGDRQTLLFSATFDDSVFALSKKLLKNPELVEVDKRNSAAVEVEQ
VIYSVDEDRKRELVSHMIGMKNWRQVLIFTRTKQMADQLAKEMCKDGLKTESIHGDKSQG
ARDRALQNFKEGITRVLVATDVAARGLDIPTLRFVINFELPYIAEDYVHRIGRTGRAGEQ
GLAMSLVSIDEQWLLEEIEVLLDTRLTPQWLAGYEPDPNKKPKDNRKNTNKSRKDRDKKR
ITGQREPSRRRK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatgtgagtacaatagcgctctttgtcactttaaagctaagcctatgtctgcc
actacattctcatcacttaatctcgacccgttattattaactgcgattgagcaaaataac
tacactcaacctaccgcaattcagattaaaaccatcccgcctattttagcgggcagtgat
gtaatgggcagtgcacaaactggcacaggtaaaaccgcagcgtttgtactaccactacta
cacaagcttttaaacacccctaaaaaagatgagctaggtgttgctcgcgtggtaatttta
acgccaactcgcgagcttgctcagcaagtatttgccagctttgaaaaatacgcccaaggc
accaatattaaaggtgcattagcgtatggcggcgcaagcataggcccacaaataaaagcc
ctaaaagatgcacaagtaatagtagccaccccggggcgcttactcgatcatattgttaaa
ggcagcgtagtgctttcaagtgttgactcactggtatttgatgaagccgatcgtatgctt
gatatgggctttattgacgaaattaaacgtatattgcgccatattccaggcgatcgccaa
actttgttattttcggcgacttttgacgacagcgtatttgcgcttagtaaaaagctactt
aaaaacccagaattagttgaagttgataaacgcaattcagcagcagttgaggttgagcaa
gtaatttactcggtagacgaggatcgcaagcgcgagctggtatcgcacatgattggcatg
aaaaattggcgccaagtgcttatttttacccgcaccaaacaaatggccgaccaactggct
aaagaaatgtgtaaagacggtttaaaaaccgagtctatccatggtgataaatcacaaggc
gcacgcgaccgcgcactacaaaactttaaagaaggcattacccgtgtattagttgccacc
gatgtagccgcacgtggtttagatattccaacacttaggtttgtaattaactttgaactg
ccatacatagccgaagattatgtacatcgcattggccgtacaggtcgcgctggtgagcaa
gggcttgcaatgtcgttagtaagtattgacgagcaatggttacttgaagaaatagaagtg
ctgctagatacccgcttaacgccacagtggctagcaggctacgagccagatcctaacaaa
aagccaaaagataaccgcaaaaacaccaataaatcgcgaaaagaccgtgataaaaaacgc
attactgggcaaagagagccaagtagaagacgtaaataa
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