Pseudoalteromonas translucida KMM 520: PTRA_a0830
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Entry
PTRA_a0830 CDS
T04220
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTRA_a0830 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptn03019
]
PTRA_a0830 (rnc)
03009 Ribosome biogenesis [BR:
ptn03009
]
PTRA_a0830 (rnc)
03036 Chromosome and associated proteins [BR:
ptn03036
]
PTRA_a0830 (rnc)
Enzymes [BR:
ptn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PTRA_a0830 (rnc)
Messenger RNA biogenesis [BR:
ptn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PTRA_a0830 (rnc)
Ribosome biogenesis [BR:
ptn03009
]
Eukaryotic type
90S particles
RNase
PTRA_a0830 (rnc)
Prokaryotic type
rRNA processing factors
PTRA_a0830 (rnc)
Chromosome and associated proteins [BR:
ptn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PTRA_a0830 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALS32136
UniProt:
A0A0U2WV33
LinkDB
All DBs
Position
I:800505..801182
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AA seq
225 aa
AA seq
DB search
MKKNVTELYKTIDYIFADQGLLEQAMTHRSHKGQHNERLEFLGDSILSFVIANALYAKFP
KAREGDLSRMRSTLVRGQTLAEFGLEFGLGDYLRLGPGELKSGGFRRESTLADAVEAIIG
AVFLDSDIERCGELILSWYEERLNAISPGLNQKDPKTLLQEHLQARKLSLPGYTVVDTKG
QAHNQTFTVECIVDGMDSIISVGSSRRKAEQKAAEKALKILKNEP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatgtaacagaactatacaaaacaatagactacatatttgcagatcaaggc
ttgcttgagcaagcaatgacgcatcgtagtcataaaggtcagcataacgagcgtctagaa
tttttaggtgattcaattttaagctttgtgattgcaaatgcgctgtatgctaaatttcct
aaagcgcgtgaaggcgacttaagccgtatgcgctctaccttagtgcgtggtcaaacattg
gctgagtttggcttagagtttggcttaggagattatttacgcttaggtccaggcgagcta
aaaagcggcggctttcgtcgtgagtcaacacttgccgatgccgtagaggcgattattggc
gctgtgtttttagattcggatattgaacgctgtggcgaattaattttatcttggtatgaa
gagcgtttaaatgctatttcaccagggcttaatcaaaaagatcctaagaccctgctgcaa
gagcatttgcaagctcgtaaactatcgttaccgggctatacagttgttgatacaaaaggc
caggcacacaatcaaacattcacggttgaatgtattgttgatggcatggatagcattatt
tctgttggtagctcgcgtcgtaaagccgaacaaaaagctgctgaaaaagcattgaagata
cttaaaaatgaaccttga
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