Pseudoalteromonas translucida KMM 520: PTRA_a1137
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Entry
PTRA_a1137 CDS
T04220
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a1137
Enzymes [BR:
ptn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PTRA_a1137
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PTRA_a1137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
ALS32396
UniProt:
A0A0U2V3H1
LinkDB
All DBs
Position
I:complement(1066779..1068332)
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AA seq
517 aa
AA seq
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MTHFNTLRLILGDQLNPAHSWYKNKQTNTLYVIAELKQETSYVKHNIQKICAFFCAMENF
ATALNQAGLNVLHLTLNETCNDEDLPALLTRIAAQHQCNTIEYQYPDEYRLKTQLANFAN
TSPLTVSGVDSEHFLLPFEEIKHRFVKDKHITMEHFYRAMRKQFNILMDSNKPHGGKWNF
DSNNRNKFSAADLAQIPPPKLFNNDVSAIIARLNKHNVSYFGKAAEQLPWPTTRKQAISC
LDYFCLYLLPYFGQFQDAMTEQSKHNSSLYHSRLSFALNAKLIHPLYVIKRVIAQYEQRP
SEISIAQVEGFVRQILGWREYVRAIYWINMPDYATKNQLKAKNTLPPYFWHAKTKMNCMH
HALCESLTTAYAHHIQRLMVIGNFCLLTAINPDEVDAWYLGVYIDAIEWVEMPNTRGMSQ
FADDGIIATKPYAASGNYINKMSDYCKNCHYKLKQKVGDDACPFNSLYWHFMHTHRAKLE
KNPRIGMVYKNWDKQEGTLQQSTLQQATYYLNNLASL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacacactttaatactcttagactcattttgggcgatcagctcaaccctgctcactca
tggtataaaaataaacaaaccaataccttatatgttattgcagagctaaaacaagaaacc
agctatgttaagcacaatattcaaaaaatctgtgcatttttttgcgctatggaaaacttt
gcaacagcattaaaccaagccggattaaatgtactgcatttaacattaaacgaaacttgt
aatgatgaagatttacccgcattgcttacccgtatagcagcgcaacatcaatgcaatact
attgagtaccaatacccagacgaatatagattaaaaacccagttagccaactttgcaaac
actagcccattaacggttagcggtgttgacagcgagcattttttactgccttttgaggaa
ataaagcaccgttttgtaaaagataaacacataacgatggagcatttttatcgcgcaatg
cgcaaacaatttaatatattaatggatagtaacaaaccacacggtggaaagtggaacttt
gatagtaataacagaaataaattttcagccgccgacttagcgcaaatcccgccgcctaaa
ttatttaataacgatgtaagcgctataattgcgcgtttaaataaacataatgttagctac
tttggtaaagccgcagagcaacttccttggcccacaacccgaaagcaagctattagctgc
ttagattatttttgtttgtatttactgccttattttggccagtttcaagatgcaatgaca
gagcaaagtaaacataacagtagcctgtaccatagccgcttatcgtttgctttaaatgca
aagttaatacaccctctgtatgtaataaagcgcgtaatagcccaatacgaacaacgtcct
agtgagatatctattgctcaagtagaggggtttgttaggcaaattttgggctggagagag
tacgtacgcgcaatttactggattaacatgccagattacgcaactaaaaatcagcttaaa
gccaaaaatacattaccgccgtatttttggcatgctaaaactaaaatgaactgcatgcac
catgcgctctgtgaaagcttaacgactgcatacgcccatcatattcagcgccttatggtt
attggtaatttttgtttattaacggctataaacccagatgaggttgatgcttggtatttg
ggcgtttatatagatgctattgaatgggtagaaatgcccaatactcggggtatgagccaa
tttgccgatgacggaattattgccaccaaaccctatgcagcaagcggtaactatattaat
aaaatgagcgactactgcaaaaactgccactataaattaaaacaaaaagtgggcgatgac
gcctgcccgtttaatagcctttactggcattttatgcacacgcacagagcaaaattagaa
aaaaacccacgcattggcatggtgtataaaaattgggataaacaagagggtacgttacag
caaagtacattacagcaagccacttactatttgaacaatctagcaagcctgtaa
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