Pseudoalteromonas translucida KMM 520: PTRA_a1142
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Entry
PTRA_a1142 CDS
T04220
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptn03016
]
PTRA_a1142 (truB)
Enzymes [BR:
ptn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PTRA_a1142 (truB)
Transfer RNA biogenesis [BR:
ptn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PTRA_a1142 (truB)
Prokaryotic type
PTRA_a1142 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALS32401
UniProt:
A0A0U2WXK6
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All DBs
Position
I:1074246..1075205
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AA seq
319 aa
AA seq
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MAKRSKGRPVDGILLLNKPIGISSNKALQQTKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTREQLIKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLTFDEFDEVNNVIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVVMLHRTAVGQYPAEKMVSLDEIEALLAKAKDEEVAPSTYLDA
LLLPLDTALVDLPVVEISKDQGSIFSHGQAIDLDIDLPEGAIKVVADGIFIGTGERNASG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtccagttgacggtattttgttgttaaacaaaccaatt
ggtatttcatcaaataaagcactacagcaaacaaaaggtgtgtactttgcacaaaaggcg
gggcacacaggtgctctagatccattggcaaccggtatgctgcctatttgttttggtgag
gcaaccaaatttacgcagtttttactcgatacagacaaaacctatgttgtacgcgctaaa
ttaggcgagagaacgacgacatcagattctgatggtgaaattgttagtaccaaagatgta
aatgtaacgcgtgagcagctgattaaagaaattgccgcttttgttggtgagtcagatcag
tatccgtcaatgtactcggcgcttaagtatcaaggtagacccttatataagtatgcacgc
gagggtattgaagtaccacgtaaatgcagaaaaataaacgtgtttagcttaacgtttgac
gaatttgatgaagtgaataacgtaatacaaatgacggcgcatgtatctaaaggcacctac
attcgtactattgttgacgacttaggtgaaaagctaggctgtggcgcgcacgttgttatg
ctacaccgtactgcggttggtcaataccctgcagaaaaaatggtgtcgctagatgaaatt
gaagcgttattagcaaaagctaaagacgaagaagttgcaccttctacttatttagacgcg
ctgttattgccactcgataccgctttagttgatttaccggttgttgaaataagtaaagat
cagggcagtatttttagtcacggccaagcaatagaccttgatatagatttgccagaaggc
gcaattaaggttgtagctgacggtatttttattggcacaggcgagcgtaatgccagcggt
catttaaaagttaaacgtggcttggccagccaacaagatgattatgtaaaacccgagtaa
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