Pseudoalteromonas translucida KMM 520: PTRA_a1144
Help
Entry
PTRA_a1144 CDS
T04220
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTRA_a1144 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptn03019
]
PTRA_a1144 (pnp)
03016 Transfer RNA biogenesis [BR:
ptn03016
]
PTRA_a1144 (pnp)
Enzymes [BR:
ptn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PTRA_a1144 (pnp)
Messenger RNA biogenesis [BR:
ptn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PTRA_a1144 (pnp)
Transfer RNA biogenesis [BR:
ptn03016
]
Prokaryotic type
tRNA degradation factors
PTRA_a1144 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
S1_2
KH-I_KHDC4-BBP
aRib
KH_SLS1_2
DUF3016
Motif
Other DBs
NCBI-ProteinID:
ALS32403
UniProt:
A0A0U2NFD1
LinkDB
All DBs
Position
I:1075980..1078106
Genome browser
AA seq
708 aa
AA seq
DB search
MQAIIKEFQLGQHTVTLETGAIARQADGAVLASIGDTSVLVTVVGKREAQPGQDFFPLTV
NYQERMYAAGRIPGGFLKREGRPNDGETLIARLIDRPIRPLFPSGFVNEVQVIATVVSVN
PEIQPDMVALIGTSAALAISGIPFSGPIGATRVGYIDGEYVLNPTLKELEESKLDLVVAG
TDNAVLMVESEADVLAEDIMLGAVVYGHEQAQSIITAIKEFKAEAGKPTWDWTAPAKNVS
LEEKVASIAADKVGEAYRITDKVARKEALGVAKDEVVAVLTSELAEGESLDKQEVGKIFG
SLEKKIVRGRIAAGEKRIDGREPDMIRALDVMTGVLPRTHGSAIFTRGETQALVTATLGT
ERDSQLIDDLTGTHKNHFMLNYNFPPFCVGETGFVGSPKRREIGHGNLAKRGIAAVMPTL
TEFPYSIRVVSEITESNGSSSMASVCGTSLALMNAGVPIKASVAGIAMGLVKEDEKFVVL
SDILGDEDHLGDMDFKVAGTAGGITALQMDIKIEGITQEIMQIALKQAKAARLHILEVMD
KAISAPSEELSPFAPRIYTMKIPQKKIAEVIGKGGATIRQLTEETGTTIEIGDDGTIKIA
ATDGESAANAISRIEQLTAELEVGTIYEGKVVRIVDFGAFVNILPGKDGLVHISQISTER
VNNVTDHLSEGQEVKVKVLEVDRQGRVRLSIKEAMESAAPAADATTDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcaattattaaagaatttcaactaggtcaacacacagtgacattagaaactggt
gcaatcgctcgtcaagcagacggcgctgtacttgcaagcattggcgacacttcagtactt
gttactgttgttggtaaacgtgaagcgcaacctggccaagactttttcccactaacagtt
aactaccaagagcgtatgtacgctgctggtcgtattcctggtggtttcttaaagcgcgaa
ggtcgtcctaacgatggcgaaacacttattgcacgtcttattgaccgtccaattcgtcca
cttttcccaagtggttttgtaaacgaagtacaagttattgctactgttgtttctgttaac
cctgaaattcaaccagatatggttgcgttaattggtacttcagctgcacttgctatctct
ggtattccgttcagtggcccaattggtgctactcgcgttggttacatcgacggcgaatac
gtacttaacccaacactaaaagagctagaagaaagcaagctagacttagttgttgctggt
actgataacgcagtattaatggttgagtcagaagcagacgtacttgcagaagacattatg
ctaggtgcggttgtttatggtcatgagcaagctcaatcgatcatcacagcaattaaagaa
tttaaagcagaagcaggcaagcctacttgggattggactgcaccagctaaaaacgtatca
cttgaagaaaaagtagcctctattgctgctgataaagtgggcgaagcttaccgcattact
gataaagtagcgcgtaaagaagcacttggcgtagctaaagatgaagttgttgctgtatta
acaagcgaacttgctgaaggcgagtcgttagataagcaagaagttggtaaaatcttcggt
tcacttgagaagaaaatcgttcgtggccgtatcgctgctggcgaaaaacgtatcgatggt
cgtgaaccagatatgattcgtgcacttgacgtaatgactggcgtattaccgcgtactcac
ggttctgctatctttactcgtggcgaaactcaagcacttgtaacagctacacttggtaca
gaacgtgattcacagttaatcgacgatttaactggcacgcacaaaaaccactttatgctt
aactacaacttccctccattttgtgtaggcgaaacgggttttgttggttctcctaagcgt
cgtgaaatcggccatggtaaccttgctaagcgtggtattgcagcggtaatgccaacattg
actgaattcccatattcaatccgtgtagtatctgaaatcactgaatcaaacggttcatct
tcaatggcttctgtgtgtggtacttcacttgcacttatgaatgctggtgtaccaattaaa
gcgtctgttgcgggtattgcgatgggtctagttaaagaagacgaaaaattcgttgttctt
tctgacatcttaggtgatgaagatcacttaggcgacatggactttaaagttgcgggtact
gctggcggtattacagcactacaaatggacattaagattgaaggtatcactcaagaaatc
atgcaaattgcgcttaaacaagcaaaagctgcacgtttacatatcttagaagtgatggac
aaagcaatttctgcaccgtctgaagagctttctccgtttgctccacgtatttacactatg
aagatcccacagaagaaaatcgctgaagttattggtaaaggtggcgcaacaattcgtcaa
cttactgaagaaacgggcacaacgattgaaatcggtgatgatggcacaatcaaaattgca
gcaactgacggcgaaagcgcagcaaatgcaattagccgcattgagcaattaactgctgag
cttgaagtaggtactatctacgaaggtaaagttgtacgtattgttgattttggtgcgttt
gtaaatattcttcctggcaaagatggtctagtacatatttcgcaaattagtactgagcgt
gttaataacgtgactgatcacctttctgaaggtcaagaagttaaagttaaagtactagaa
gtagaccgccaaggccgtgtacgtctaagtattaaagaagcaatggaatctgcagcacct
gcagctgatgcgacaactgacgcataa
DBGET
integrated database retrieval system
