Pseudoalteromonas translucida KMM 520: PTRA_a1177
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Entry
PTRA_a1177 CDS
T04220
Symbol
rlpA
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptn01011
]
PTRA_a1177 (rlpA)
Enzymes [BR:
ptn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PTRA_a1177 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ptn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PTRA_a1177 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
ALS32428
UniProt:
A0A0U2V3K5
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All DBs
Position
I:complement(1098498..1099271)
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AA seq
257 aa
AA seq
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MQFYTRFFTISFILILLSACSSSNNTPSSRYSMRHDAAPLRAPTTLEMQDAVVVKVTKSA
SASRPYTVLGKSYTPMLDETGYTEEGIASWYGRKFHGYHTSNGEIYDMFAMTAAHKTLPL
PSFVKVTNTSNNKSVIVRVNDRGPFHEDRVIDLSYAAAYKLGYYTHGTAKVKLEAVTLDN
STAHLTYIQVAAGSTLANIEALASRLRLDYKLPTNIVQKDDIFRLHLGPIKDAQHAQQVL
TQLKQNQFKNAFLLYTQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttatactcgattttttactatcagctttatcctaatacttttaagtgcttgt
agtagttcaaataacaccccaagcagccgctacagcatgcgccatgatgctgcaccatta
cgtgcgcctaccacattagaaatgcaagacgctgtagtagttaaagttactaaaagcgcc
agtgcaagccgcccttataccgtattaggtaaaagttatacgcctatgcttgacgaaaca
ggctataccgaggaaggcattgcatcgtggtacggccgtaaatttcatggttatcacact
tcaaatggcgaaatatacgatatgtttgccatgaccgctgctcacaaaactctgcccttg
cctagctttgtaaaagtaacaaataccagtaataataaatctgtcattgtgcgcgtaaat
gaccgtggcccatttcatgaagatagagtgattgatttatcctacgcagccgcttacaaa
ctaggttattacacccatggtacagccaaggttaagcttgaagcagttacgcttgacaat
tcgactgcgcatttaacctatattcaggtagcagcaggtagtacactagcaaatattgaa
gcactggctagtcgtttacgcctcgattataaattacccactaatatcgtgcaaaaagac
gatattttcaggttgcatttagggccaattaaagacgcccagcatgcacagcaagtatta
acacaattaaaacaaaaccaatttaaaaacgcgttcttgctttacactcagtaa
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