Pseudoalteromonas translucida KMM 520: PTRA_a2475
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Entry
PTRA_a2475 CDS
T04220
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03030
DNA replication
ptn03430
Mismatch repair
ptn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTRA_a2475 (dnaE)
03430 Mismatch repair
PTRA_a2475 (dnaE)
03440 Homologous recombination
PTRA_a2475 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptn03032
]
PTRA_a2475 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a2475 (dnaE)
Enzymes [BR:
ptn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTRA_a2475 (dnaE)
DNA replication proteins [BR:
ptn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTRA_a2475 (dnaE)
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTRA_a2475 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
NAGPA
Motif
Other DBs
NCBI-ProteinID:
ALS33563
UniProt:
A0A0U2WNV4
LinkDB
All DBs
Position
I:complement(2323508..2326999)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPDFVHLRVHSDFSMVDGLAKTKPIVAKAQELQMPAIAITDQMNLCGLVRFYETAHST
GIKPIVGADFWLRSPEFENEPSRITILAKDNQGYKNLTLLISKAYQRGHVFHRPVIDRDW
LIELKAGLIILSGAKDGDLGKALLKNNPSVIESVVSFYKQHFSDNYYLELVRTNRPLEED
YLHMAVELAAKEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSEEQYL
KTPEQMAELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGSLKIEDFLVKVSQDGL
EERLQFLFPDEQERKEKRVEYDERLDIELGVINEMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERISMPDFDVDFCMDRRDEVIDHVSA
LYGRNAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMIPGDPGMTLAKAFDIEPR
LQEAYDGDNEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWALDMTNERLARTGKEPVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDSFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEDGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHHPA
EFMAAVMSADMDNTDKIVILVDECENMKLTLLPPDVNAGEFKFTVNLQGEIVYGIGAIKG
VGEAPVEAILEARAKGGPFKDLFDFCARVDLKRLNKRVTEKLIYSGALDQLGPEKTQSGR
ATLLASLKSAMRAADQHNKAELLGQSDLFGLLATEPDEVEQAFIKATGLTDNEWLDGEKE
TLGLYLTGHPINQYRRELKYYTSGKLVDLQPTNRDVISTAAGLVISARVLINKKGNRWAL
ITLDDKSARIDVRLYSDEFEKYQDMLQVNNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQVEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALAQLTLGIEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccagattttgttcacttaagagttcactctgatttttcgatggttgatggc
cttgccaaaaccaagccaattgtagccaaagcacaagagctacaaatgccggcaattgct
attaccgaccaaatgaacttatgtggcttagtgcgtttttatgaaacagcccacagcaca
ggtataaaacctatagtgggtgctgacttttggctacgcagccctgagttcgaaaacgaa
ccaagtcgcattactattttagcaaaagacaatcaaggttataaaaacctcactttatta
atatctaaagcatatcagcgcgggcatgtatttcatcgcccggtgattgatcgtgattgg
ctaatagaacttaaagccggattaataatactctctggtgcaaaagacggcgatttaggt
aaagcgttattaaaaaataatccgagtgttattgaatcggttgttagtttttataaacag
cattttagtgataactactaccttgagctggtgcgaactaatcgaccgcttgaagaagat
tacttgcacatggcggttgagcttgctgctaaagagcaattacccgttgtggccactaac
gaagtggtatttttaaagccagaaaactttgaagcacacgaaattcgcgtggctattttt
gatggttatacactggatgataaacgccgccctaaacggttttcagaagaacaatactta
aaaacgccagagcaaatggctgagttatttagcgacattccagaggcattacaaaacacc
gtagaaatagccaaacgctgtaatgtaacggtgcaacttggcacttactttttaccagat
tatccgaccggctcacttaaaattgaagattttttagttaaagtgtcacaagacggtctt
gaagagcgattgcagtttttatttcctgatgagcaagagcgtaaagaaaaacgcgttgaa
tacgatgagcgcctagatatagagcttggtgtaattaacgaaatgggatttccaggttat
ttcttaatcgtaatggaatttattcagtggagcaaagataacaatattccagttggccct
ggccgagggtcaggtgcgggatcactggtagcctacgcgcttaaaattaccgaccttgat
ccactggaatttgacttactgtttgagcggtttttgaacccagaacgtatttcaatgccc
gatttcgacgtcgatttttgtatggataggcgcgatgaggtgattgatcatgtatcggcc
ttgtatgggcgtaacgcggtatcgcaaattattacctttggaaccatggcggcaaaagcg
gtaatacgcgatgttggccgggtattaggtcacccgtacggttttgttgatcgtatttca
aaaatgatcccaggcgatcccgggatgacacttgccaaggcgtttgatatagagccacgc
ttgcaagaagcctacgatggcgacaatgaagtaaaagatttaatcgacatgtgtcgcatt
ctcgaagggtgtacacgtaacgccggtaagcatgcgggtggggtagtaatatcgcccacc
acaattaccgactttgctgctctttattgcgatgacgaaggtaaatttccggttacccag
tttgataaaaacgatgttgaaactgccggtttagttaagtttgactttttaggcttacga
acgctgactatattgcagtgggcgctcgacatgaccaacgagcgcttagcgcgtaccggt
aaagagccagtagatattaatactattccgctggatgataaaaagagtattgagttacta
ctgcgcgccgaaacgaccgcggtatttcagctagaatcacggggcatgaaagacttagta
aggcgcttaaagcccgacagttttgaagatatgattgctttggtagccttgtttcgacct
ggtccgctgcaatcgggcatggtagataactttatcgaccgaaaattaggccgcgaagaa
atctcataccctgatgcgcagtatcagcacgaaagcttaaaacctattttagagccaacc
tacggcattattttgtatcaagaacaagtaatgcaaatagcccaagtattagcaggctat
acactaggcggcgccgatatgctgcgccgagctatgggtaagaaaaagcccgaagaaatg
gcaaaacagcgttcaacatttgaagatggtgcgcgaaataacggcattgacggcgaacta
gcaattaaaatcttcgatctggtagaaaagttcgcaggttatggttttaataaatcgcac
tccgctgcgtatgcattagtgtcgtatcaaacactgtggatgaaaacccatcatccagca
gagtttatggctgcggtaatgtcggccgatatggataataccgacaaaatagttattttg
gtggatgaatgtgaaaacatgaaactcaccttgctcccgcctgatgtgaatgctggcgag
ttcaaatttactgtaaacctgcaaggcgaaattgtttacggtattggtgctattaaagga
gtaggtgaagcacctgtagaggcaattttagaagcgcgcgctaagggcggaccatttaaa
gatttatttgatttttgtgcccgagttgatttaaaacgcttaaataaacgtgtaaccgaa
aaacttatttattcgggagcacttgaccagctaggccctgaaaaaactcaatcagggcgc
gccacgttattggcaagcttaaaaagtgccatgcgcgccgccgatcagcacaataaagca
gagttattagggcaaagtgatttatttggcttattagccactgagcctgatgaagtagag
caagcctttattaaagccacaggactcaccgataacgaatggctcgatggcgaaaaagaa
acccttggtctttatttaactggtcatccaataaatcaatatcgccgcgagctaaaatat
tataccagtggtaaattggtcgatttacagcctactaatcgcgatgtaatatctacagct
gcagggcttgtaatttcggccagagtgctaattaataaaaaaggaaataggtgggcatta
ataactttagatgacaagagcgcccgcattgatgtacgcttatattcagatgagtttgaa
aaataccaagatatgctccaagttaataatattttggtgatatctggacaggtcagcttt
gataacttctctggtggtattacaatgaccgccagagaaataaacaccattgctcaagcg
cgtgaaaaacgtattaaagcgattaaaatgacgctgaacatggtgcaagtcgaggcaggt
ttcttcgataaattacaaaaagtactcgaaccatataaaatgggaacgtgtccgatcaag
gtttattaccaacgcccagatgcattggcgcaattaaccctagggatcgaatggtgtgtt
acgccaagtgacgacttaattcataagttatcgctaatggcagcgcaagatgtagaacta
gaatttaactaa
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