Pseudoalteromonas translucida KMM 520: PTRA_a3085
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Entry
PTRA_a3085 CDS
T04220
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PTRA_a3085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a3085
Enzymes [BR:
ptn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PTRA_a3085
DNA repair and recombination proteins [BR:
ptn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PTRA_a3085
Prokaryotic type
PTRA_a3085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
BESS
Motif
Other DBs
NCBI-ProteinID:
ALS34101
UniProt:
A0A0U2VL18
LinkDB
All DBs
Position
I:complement(2896182..2896844)
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AA seq
220 aa
AA seq
DB search
MSDWTAFLKQELQQAYMQQTLDYVAKRRSEGVAVYPPKEQVFSAFTATPLSDIRVVILGQ
DPYHGEGQAHGLCFSVLPEVKKLPPSLKNIYKELASDISDFVIPTHGYLQSWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDKVIAHINTHCEGVIFILWGAHAQKKGKGIDSARQHI
LAGPHPSPLSAHRGFFGCRHFSATNALLQSQGKTPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggactgcatttttaaagcaagaattacagcaagcatatatgcagcaaaca
ctcgactacgttgctaagcgccgcagcgaaggcgttgctgtttatcctccaaaagagcaa
gtgtttagcgcatttactgcaacaccgcttagtgatatacgtgttgttattttagggcaa
gatccttaccacggtgaaggccaagcacatggtttgtgtttttcggtattacctgaggtt
aaaaaactgccaccttcgcttaaaaatatttataaagagctggctagcgatataagcgat
tttgttattcctacccatggctacttgcaaagctgggcagagcaaggagtatttttactc
aatacagtgcttacggtagagcaaggccaagcccactcgcataaacacttagggtgggag
caatttaccgataaggttattgcgcatataaacacccattgtgaaggcgtaatatttatt
ttgtggggtgctcatgcacaaaaaaaaggtaagggaattgatagcgcacgccagcatatt
ttagcagggccacatccgtcgccactgtctgctcaccgagggttttttggctgtaggcat
ttttcagccactaatgcgttattacaatctcaaggtaaaacgccgattaattggcaagta
taa
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