Pseudoalteromonas translucida KMM 520: PTRA_a3302
Help
Entry
PTRA_a3302 CDS
T04220
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03030
DNA replication
ptn03410
Base excision repair
ptn03420
Nucleotide excision repair
ptn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTRA_a3302 (polA)
03410 Base excision repair
PTRA_a3302 (polA)
03420 Nucleotide excision repair
PTRA_a3302 (polA)
03440 Homologous recombination
PTRA_a3302 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptn03032
]
PTRA_a3302 (polA)
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_a3302 (polA)
Enzymes [BR:
ptn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTRA_a3302 (polA)
DNA replication proteins [BR:
ptn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PTRA_a3302 (polA)
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PTRA_a3302 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTRA_a3302 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ALS34293
UniProt:
A0A0U2VLL6
LinkDB
All DBs
Position
I:complement(3109847..3112582)
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHRIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPVTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLEKYGSLQGVMDNASEIKGKIGEKLAAALDHLPLSY
QLATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAELLDNPKDTETHLAVPTE
ANEVPKVAEAQYETILTESQFDALIEQLNDAELFAFDTETTSLDYMQAQLVGMSFAVKAG
EAAYLPVAHDYPGAPEQLSLEFVMQKLGPILADAKKAKVGQNLKYDKSVLANAGYELNGI
KFDTMLESYVFNSVGTRHDMDSLALKFLGHKNISFEDIAGKGKKQLTFNQVELEKAAPYA
AEDADITLRLHQVLWPKLAADEKLKSVFEDIEMPLVNVISDIERTGVAIDSKMLAAHSQR
LGERLLELEKEAYEIAGEPFNLSSPKQLQVLLFEKLELPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLSAFANGLDVHSATA
AEVFGVSLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLYLPEIKAQNGARRKGAERAAINAPMQGTAADIIKK
AMLSVHSWVYEQAPNTVKLLMQVHDELVFEIKTDCVDAYTKHICELMSQAATLDVPLIVE
ADEGDNWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccacttattttagttgatggctcttcatatttatttcgt
gcttatcattcaccgccacatttaactaactcaaaaggtgaggcgacaggagcgatatat
ggtgtgatcaacatgctaaaaagtttgatcagacaatatgatccctcgcatatggtggtt
atatttgacgctaaaggcaaaacctttagaaatgatatgtatagcgaatataaagcgaat
cgtccgccaatgccggatgacttacgcacgcaaatagcgccaatccaccgtattattaag
gcaatgggttttccgcttattagcattgaaggtgttgaagccgacgatgtaattgggacg
tttgcgcgcatagcgtcagagcaaaagcgccacgtactggtttctaccggcgataaagat
atggcgcagctggtaaatgaacatgtaacgcttataaacaccatgaccgacagtatctcg
gatcctgttactgtggttgaaaaatttggtgtgggcccagaacttattatcgattattta
gctttaatgggcgataaagtagataacattccaggggtagaagggtgtggtcctaaaacc
gcggttaagtggttagaaaaatacggatcgctacagggcgttatggataatgccagcgag
atcaaaggtaaaataggagaaaagttagcagctgcactagatcatctgcctttaagctat
caacttgccactattaagtgtgatgttgaggttgaatcggatcttgatacctttaagtta
caagaaccaaataaagatgagctaattgccctttacggtgaatgtgaatttcgtcgttgg
ttagcagagttactcgataatcctaaagataccgaaacacacttagctgttcccactgag
gctaacgaagtaccaaaagtagcagaggcgcaatacgaaactattttaaccgagagccag
tttgatgcattaatagagcagctaaatgatgctgagctatttgcctttgatacagaaaca
accagccttgattacatgcaagcacagttagtaggcatgagctttgcggtaaaagccggt
gaggctgcttatttacccgttgctcacgactatccgggcgcacctgagcaactaagcctt
gagtttgtaatgcaaaaattaggacctattctagccgatgccaaaaaagcgaaagtaggg
caaaaccttaaatacgataaaagcgtattagcaaatgcgggttacgaattaaacggtatt
aagtttgataccatgcttgaatcgtatgtgtttaacagcgtgggtacgcgccatgacatg
gattcactggcgcttaaatttttaggccataaaaatatcagctttgaagatattgctggt
aaaggtaaaaagcaacttacttttaatcaagtagagctagaaaaagccgccccctatgcc
gctgaagatgcagatattacgctgcgtttacaccaagttctatggcccaaattagccgct
gacgaaaaactaaagtcagtattcgaagatatagaaatgccactggttaatgttatttct
gatattgaacgcactggtgtagcaatagacagcaaaatgcttgctgcgcacagccaacgt
ttaggcgagcgtttattggagctggaaaaagaagcgtatgaaatagcgggggaaccattt
aatttaagctctccaaaacaactacaagtattgttgtttgaaaaactggaactgccaata
attaaaaaaacgcctaaaggcgcgccttctaccgcagaagaagtattacaagaattagcg
cacgactacccactgcctaaagtaattattgagcaccgtggtttatcaaagcttaaatca
acctataccgacaaattaccgttaatggttaacgaaaaaacgcagcgtgtgcatacctcg
tatcatcaagcagtcacggcaactgggcgtttaagttcaaccgatcctaatttacaaaat
attccaattcgatcagaagaaggacgtcgtattcgtgaagcgtttatagcggccgatggt
tataaaattgtcgctgccgattatagccaaattgagctacgtataatggcgcatctttca
caagataaaggtttattaagtgcgttcgctaatggtttagacgtgcacagtgccactgca
gcagaagtatttggtgtaagtttagaagaagtgaccagcgatatgcgccgtaaagctaaa
gcagttaactttggcttaatttatggcatgtcggcatttggtttagcacgtcagctggat
gtgccacgccatgaagcgcagcattatattgataaatattttgagcgtttcccaggtgtt
ttagaatatatggaaacaacgcgtgaaaaggctgctgaaaacggttatgtagagactatt
tttggacgccgtttatatttaccagaaattaaagcccaaaatggtgcgcgtagaaaagga
gccgagcgcgcagcaatcaacgcgcctatgcaaggcactgctgccgatattattaaaaag
gcaatgttaagtgtacacagttgggtatacgagcaagctcccaataccgttaagctatta
atgcaagtacacgatgaattggtatttgaaattaaaacagactgtgttgatgcttacaca
aagcatatttgcgaactaatgtcgcaagcggctactcttgatgtgccacttatagttgaa
gctgatgaaggcgataactgggaacaggctcactaa
DBGET
integrated database retrieval system
