Pseudoalteromonas translucida KMM 520: PTRA_b0439
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Entry
PTRA_b0439 CDS
T04220
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine1618-N6)-methyltransferase
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
ptn
Pseudoalteromonas translucida KMM 520
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptn03009
]
PTRA_b0439 (rlmF)
Enzymes [BR:
ptn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
PTRA_b0439 (rlmF)
Ribosome biogenesis [BR:
ptn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PTRA_b0439 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_31
Methyltransf_12
Methyltransf_25
PrmA
Methyltransf_11
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ALS34920
UniProt:
A0A0U2X2Q8
LinkDB
All DBs
Position
II:complement(431677..432609)
Genome browser
AA seq
310 aa
AA seq
DB search
MKASTSRAKLHPRNQHLNGYDFDLLTEQHPVLSAFIITTPAGTKSIDFSDNKAVKTLNQA
LLKAHYKVDFWDIPQHNLCPPIPGRVDYIHYLADLLADDNQTHIPTGRQVKVLDIGTGAN
LVYPLTGGHEYNWHFTGTDIDPAAIKVAKQIAQFNHLKITLKQQKNAANIFKGVINSKDL
YHLTLCNPPFHASSEDAVKGSERKWKNLGKAPSSTLNFGGQNNELWCEGGEVQFISNMIK
ESAAVAEQVMWFTSLVSKKDNIAALEQALKQHPIAQYKIVDMAQGQKVSRFIAWSYFDKD
TRAQICEELG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagcacctcacgcgcaaaactacaccctcgtaatcaacacttaaatggctac
gattttgacctattaactgagcagcatcctgtactttctgcttttattattacaacacct
gcaggtacaaaaagtattgattttagtgataacaaagcggtaaaaacacttaatcaagcc
cttttaaaagcccattacaaagtagatttttgggatattccacagcacaacttatgccca
cctattccggggcgagtagactacattcattatttggccgacttattagccgacgataac
caaacgcacattcccactggccgccaagttaaagtattagacattggcaccggcgctaac
ttggtttacccgctcacaggcgggcatgaatataactggcattttactggcaccgacatt
gaccctgcagccattaaagtagcaaaacaaattgcgcaatttaatcatttaaaaataacc
ttaaaacagcaaaaaaatgccgcaaatatattcaaaggagttataaacagtaaagatctg
tatcacttaacgctgtgtaacccgccgtttcatgccagcagcgaagacgctgttaaaggt
agcgaacgtaagtggaaaaaccttggcaaagcacctagcagcacgcttaactttggtggt
caaaataacgagctatggtgcgaaggcggtgaagtgcagtttatctctaatatgattaaa
gaaagtgcagccgttgctgagcaagtaatgtggtttacctctttagtctctaaaaaagat
aatattgcggctttagagcaagcattaaaacagcaccctatagcccaatataaaatagtt
gatatggcacaagggcaaaaagttagtcgttttattgcttggagttattttgataaagac
acgcgtgcgcaaatttgcgaagaactcggataa
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