Pseudoalteromonas translucida KMM 520: PTRA_b0573
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Entry
PTRA_b0573 CDS
T04220
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ptn
Pseudoalteromonas translucida KMM 520
Pathway
ptn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PTRA_b0573 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptn03400
]
PTRA_b0573 (uvrA)
DNA repair and recombination proteins [BR:
ptn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTRA_b0573 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PTRA_b0573 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
DUF4350
SLFN-g3_helicase
Viral_helicase1
MCR
Motif
Other DBs
NCBI-ProteinID:
ALS35031
UniProt:
A0A0U2WIZ4
LinkDB
All DBs
Position
II:complement(552988..555552)
Genome browser
AA seq
854 aa
AA seq
DB search
MSSISKNATKPVNHTLQQQTHSISSAPEHCIQVRGARVHNLKNVDVDLPRNALIVFTGIS
GSGKSSLAFGTLFAESQRRYLDSVSPYARRLIDQVDEPDVDDINGLPPAVALQQQRGTPS
VRSSVGSVTTISNTLRMLYSRAGDYPSGQSILYADAFSPNTPQGACTLCHGIGRVFAVTE
KLLVPDDTKTIRERAIAAWPPAWQGQNLSRILVSLGYDIDTPWKLLPKKTRDWILFTDET
PVVPVYPQYSKEQTRNAIEKNEKPSYMGTYSSAKRFILHSFATTQSPRTKKRVSQFMQIS
ECPDCKGKKLKQQSLSVKFTGLDIGELSQLTLTELALRLRDIAKIKPAKNSPNREKAIVA
QRIASDILARVEALTTLGLGYLSLQRTTPTLSAGELQRLRLATQIRSQLFGVVYVLDEPS
AGLHPADTQALLGALDQLIAAGNSVFVVEHDVSVIKHADWIVDVGPDAGTHGGEVIYSGP
ISGLQGVAKSHTARFLFTADAITKHTCRQPQAWLKLAAIERNNLQKLDVEFPLGVMTTVT
GVSGSGKSSLISQALVELVYDALGQKATLESPTDEAELLEQELEIPTGGQITDGMQHVKR
LVNVDQKAIGRTPRSNLATYTGLFDHVRKLFASTNKSKARRYDMGRFSFNVKKGRCANCE
GVGFVSVELLFLPSVYSPCQVCQGQRYNEQTLEVCYREKNIAQVLDLTVESARQFFIDEP
QISRALDTLLQVGLGYLRLGQPATELSGGEAQRIKLATELQRTQRGDTLYVLDEPTTGLH
PADIAMLMVQLNKLVDAGNTVIMVEHDMQVASNSDWVIDMGPSAGDHGGQIVAQGSPAQV
AKSKTSQTAPFLLV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatcagcaaaaacgcaacaaaacctgtaaaccacacacttcaacagcaaacg
cacagcatttccagtgcacctgagcactgtattcaggttcggggtgcgcgggttcacaat
ttaaaaaatgttgatgtagacttaccccgcaacgcactcatcgtttttactggtatatcg
ggatctggaaaatcatctctcgcttttggcaccttgtttgccgagtcacaacgccgctat
ctcgattctgtatcgccttacgcgcgaagattaattgaccaagtagatgagcccgatgta
gatgatataaacggcctacctcctgcagtagcactgcaacaacaacgaggcaccccatcg
gttcgctcatctgtgggaagtgtaactactatttctaataccctgcgaatgctctactct
cgtgcaggcgactaccctagcggtcaaagtatactctacgccgacgcattttcccctaac
actccacaaggtgcctgcaccttatgtcatggtattggccgagtgtttgcagtaacagaa
aagttacttgtacctgatgatacaaaaacaattcgcgaacgggccatagctgcatggcct
cctgcgtggcaaggacaaaacctcagccgtatacttgtctctcttggttacgacattgat
acaccatggaaattactccctaaaaaaacccgcgattggattctatttaccgacgaaact
cccgttgtacctgtttacccgcaatacagcaaagagcaaactcgcaacgccattgaaaaa
aatgagaagccgagttacatgggtacatactcaagtgctaaacgttttattttgcactct
tttgctaccacgcaaagcccgcgaactaaaaaacgtgtatcacagtttatgcaaatttct
gaatgccctgattgcaaaggtaaaaaattaaaacagcaatccttgtcggtcaagtttaca
ggccttgatattggtgagttatcccaattaacgctaacagagctagcactgcgactacgt
gatattgctaagataaagccagccaaaaattcgcctaatagagagaaagcaattgtagct
cagcgaattgccagcgacattttggcccgggtagaggcactaacaacacttggcttaggg
tatctgtcgttgcaacgtaccacacccactttatctgcaggcgaactacaacgcttacga
ctagcaacccaaattcgttcacaactatttggtgtggtttatgttttagatgaaccctca
gcaggactacatccagcagatacccaagcattgcttggggcgcttgatcaactcattgca
gctggtaactctgtatttgttgtagaacacgatgttagcgttattaaacatgccgattgg
attgttgatgttggcccagatgctggtacgcatggcggtgaagtgatttacagcggccct
attagtggtttacaaggcgttgctaaatctcataccgctcgatttttgtttactgcagac
gcgataaccaaacacacttgcagacaacctcaagcctggctaaagctcgcagcaattgag
cgtaataacttacaaaaattagatgttgaatttccactgggcgtgatgacaaccgttacc
ggagtttctggatcgggtaaatcaagcctcataagtcaagctctagtggagctggtttat
gatgcgttaggacaaaaagctactttagagagcccaactgacgaagccgagttactcgag
caagaactagaaattcccactggcgggcaaattacagatggcatgcagcacgtaaaacgt
ctagtaaatgtagatcaaaaggcaattgggcgtacacccagatcaaacctcgccacctat
actggcttatttgatcacgtccgcaaattatttgcatccactaacaagtctaaagcacga
cgctacgatatgggccgcttttcgttcaacgtgaaaaaaggccgctgtgctaattgtgag
ggtgtggggtttgttagtgttgagctgttatttttgccaagtgtttattcaccgtgtcaa
gtatgccaaggccagcgttataacgagcaaacacttgaagtgtgttatcgcgaaaaaaac
attgctcaagtactcgatttaacggttgaatctgcacgtcaattttttatagatgaacca
cagatatcacgagctttggacactttgttacaagtaggcctaggatatttacgcctcggc
cagccagcaaccgagttatctggcggcgaagcccagcgtattaaacttgcaaccgaatta
cagcgcacacaacgcggtgatactctttatgtacttgatgagcctactactggcctgcat
ccagctgatatagcaatgctgatggtgcaattaaataagcttgtagatgcaggtaacacc
gttattatggtcgaacatgatatgcaggttgccagtaatagtgattgggttatcgacatg
ggccccagcgcaggtgatcatggcggacaaatagtcgctcaaggctcccctgcacaggtc
gcaaagtcaaaaaccagccaaacggctccctttttattagtctaa
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