Picrophilus oshimae: PTO1245
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Entry
PTO1245 CDS
T00177
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pto
Picrophilus oshimae
Pathway
pto03420
Nucleotide excision repair
pto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PTO1245
03430 Mismatch repair
PTO1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pto03400
]
PTO1245
Enzymes [BR:
pto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTO1245
DNA repair and recombination proteins [BR:
pto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PTO1245
MMR (mismatch excision repair)
Other MMR factors
PTO1245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_11
UvrD_C_2
AAA_12
ResIII
NAT10_TcmA_helicase
AAA
DEAD
DUF2800
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AAT43830
UniProt:
Q6KZM2
LinkDB
All DBs
Position
1248611..1251169
Genome browser
AA seq
852 aa
AA seq
DB search
MENTLIIANPGTGKTMTIAESVARLIFNGEDPSSILCITFTNRAVDEMRSRIESMLKKMN
IKINIMDLNITTFHSYAYNYIKDFIENRNIVSNHYTRYLILKALEESNAFNYSMDYIIEN
LVPKLENAIRFVKNFGIGINEIKTHLDKIRENLVYYYNKKRIGNITLEEEIKMLDYFIYV
YNYYEENKNGIDYTDILNIFLKHFNNKIYKYVFVDELQDVNILEYKIALLSGDKIFAVGD
RKQSIFGFQGGSLKIFSDIIKSDDFDKRLLSKNYRSVNSILKYAGAYMSGIDLYREELNN
FSSDRGDGDLIDIIETEDYSSIIDIIKNLDGTTGIIVRTNEQLFSVSRILDDAGIKYSCD
GISFQAGEAKREIITFLKGIFYDDPEYIIKALFTIYGSSNLKEAFYISEKYRENPESFNI
YDFSNTTIKLRTDLTFSGIEKIFRDHIIPVSLRHGADYYHAALSIFRSLKDFFTLDEMPT
RKDFFDYLSLCDVSSGTSNGGNIYITTVHSAKGLSYDNVIYIPEKKRTYDKFIDVISFSI
VKACTDYDVSEDLELEDIRIDFVAFTRARYRLFILCNPGYSSMYFIDGLCRLRSINNHNE
INVLGRESWLRSLIYDYFNKKNILSYSLVKYTERPFEFLKYFILNLNFSGPAAEYGLNAH
TIAELMYRDEIEYNDLNINDKTIYKNVQAIKNELEKLNLRQVDAEKSIIININDMFDDLN
YDLKFYGKIDAIFSSGSRYLIIDYKTDKNRNNANEHMVQLAAYKMLFGRAYNISEDLIDT
AIAYIALRGNINTGKVDRAIMYKNPGDKNIIKLKSYINNFIDYKNDPEKFIERLYSEKSK
EPLFKAVLNELT
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacattgataatcgcaaatcctggcacaggaaagacaatgacaatagctgaa
agcgttgcaagattgatatttaatggtgaggacccatcaagtatactatgcataacattt
accaaccgggccgttgatgagatgaggagcagaatagaatcaatgctcaaaaagatgaat
ataaaaataaacataatggatttaaatataacaacgtttcacagctatgcatacaattac
ataaaggatttcatcgaaaatagaaatatagtatcaaaccattacacaaggtatcttata
cttaaggcgcttgaagagtcaaacgcttttaactattccatggattatataatagaaaat
cttgttccaaagcttgaaaacgcaataagatttgtaaaaaatttcggcataggcattaac
gagataaaaacacatcttgataaaataagggaaaaccttgtatattattataataaaaaa
aggataggcaatataacactggaagaggaaataaagatgcttgattattttatttacgtt
tacaattactatgaggaaaacaaaaacggtattgattataccgatattttaaacattttt
ctgaaacattttaataataaaatttacaaatacgtctttgtggatgagctgcaggacgtt
aacattcttgaatataaaattgcattattatcaggagataaaatcttcgcggttggtgat
agaaaacaatccatatttggcttccagggcggttcattgaagatcttttcagatataata
aaaagcgatgattttgataaaagattgctatcaaagaattaccgcagtgttaatagtata
ttaaaatacgccggggcttacatgtcaggtatagatttatacagggaggaattaaataat
ttctcaagcgacaggggcgatggtgatttgatagacatcattgaaacagaggattattca
tcaataattgacataataaagaatcttgatggaaccacaggtataatagtaagaacaaat
gagcagctcttctcagtttcaaggattcttgatgatgccggcattaaatacagctgtgac
ggcatatcatttcaggccggtgaggcaaaaagagagattataacctttttaaagggtatc
ttttatgatgacccggagtatataataaaggcgctttttacgatatacggtagcagtaac
ctaaaggaggccttttatatatcagaaaagtacagggagaaccctgaaagctttaacata
tacgatttttcaaacacaacaattaaattaagaacggatttaacattttcaggcattgag
aaaatatttagagatcatataataccggtgtcattaaggcatggagccgattactaccat
gcagccctgtcaatattcaggtcattaaaggatttttttacacttgatgaaatgcccaca
agaaaggattttttcgattatttatcattatgtgacgtttcatccggcacaagtaatggc
ggaaacatttacataacaacggtgcacagcgcaaaggggctttcatacgataatgttata
tacatacccgagaaaaaaaggacatatgataaattcatcgacgtaatatcattttcaata
gttaaggcatgcacggattacgatgtttcagaggatcttgaactcgaggatataagaata
gactttgtggcatttaccagggcaaggtaccgtttatttattctatgcaatcccgggtac
tcatcaatgtattttatagatggcctctgcaggctcagatccattaataatcataatgaa
ataaatgtattgggcagggaatcatggctcagatctttaatatacgattatttcaataaa
aagaatatactttcctactcgcttgtaaaatacactgaaaggccatttgagtttttaaaa
tatttcatattaaatcttaacttttcaggtcctgctgccgagtatggtttaaatgcacac
acaatagcggagctaatgtacagggatgaaatagaatacaacgatctaaacattaatgat
aaaacaatatataaaaacgtccaggcaataaaaaacgagcttgaaaaacttaatctgaga
caggttgacgctgaaaaatccattataataaatattaatgatatgttcgatgatttaaat
tacgatttaaagttctatggaaagatagatgcaatattttcatcaggatccagatacctt
ataatagattataaaacggacaaaaacaggaacaatgcaaatgagcacatggtgcagctg
gctgcatataaaatgctctttggcagggcatataatatttcagaggatttaatagatact
gcaatagcatacatagcccttcgtggaaacataaacaccggaaaggttgacagggcaata
atgtataaaaatccaggcgataaaaatataataaaattaaaatcatatataaacaatttc
atagattacaaaaatgaccctgaaaaatttatagaacggctttacagtgaaaaatcaaaa
gaaccattatttaaggctgttttaaatgaattaacataa
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