Picrophilus oshimae: PTO1380
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Entry
PTO1380 CDS
T00177
Name
(GenBank) helicase involved in UV-protection
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
pto
Picrophilus oshimae
Brite
KEGG Orthology (KO) [BR:
pto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pto03400
]
PTO1380
Enzymes [BR:
pto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTO1380
DNA repair and recombination proteins [BR:
pto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PTO1380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
ResIII
Helicase_C
HHH_5
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
HHH_2
IMS_HHH_1
nSTAND3
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AAT43965
UniProt:
Q6KZ87
LinkDB
All DBs
Position
complement(1378134..1380158)
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AA seq
674 aa
AA seq
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MKVSDVFPDEFLNITGSDFELYKHQIDAIERLKNNENVIVSVPTASGKSLIGYYAIYKAF
LAGKKSMYIVPLRSLAMEKYEELLNLRSLNMRITISIGDYDSPPSFIKNNDVIVVTSERA
DSMIHHDPDIINDFGAIIADEIHIINDEDRGPRLETVLSSIRVINPDALILGLSATISNV
NELAQWLNASTVVSNFRAVPLELGIIYKKRLITDSYERYLGQLDELSLIKDIINDGGQAL
VFRNSRKNAEKYAEMLIQHLPEFNDFNNDGMPESLVKMIRHGIAYHHAGLSNEDRRNIEE
MFKNGYIKVISATPTLAAGVNLPARLVIIRDITRYSNGYSRPISNIEIQQMLGRAGRPKY
DKMGYGYIYAASPASYDAAKKALSGEPEPVISKMDSQRLMRFNILALISSGMASRMEDLI
LFYNETLMAIQKDVDDYYIESALYFLKENGFIDGDVTYNATRLGRLTSDLYIDPETALIL
KSALDHDYDEKLYLYYICRTPDMINIPAGTREYEYIEDFLEDINVFDFSEESLSAAKTAM
VLLGWINEMPMQKITDTYNIGPGDVQQKASSADWISYSLYRLSSVYKKEMESKLFHLNIR
IKEGIKPDLIDLIKIPKVGRVRARRLYDNGFKTVDDIARSSPENIEKIFGFSKNLAAEIV
NSAMKISSMYYRSQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttcagatgtctttcctgatgaatttttaaatatcactggttctgattttgag
ctttacaaacatcaaatagatgcaatagaaagattaaaaaacaatgaaaatgttatagtt
tctgttccaacagcatctggcaagagccttataggctactatgcaatatacaaggcattt
ttggcaggtaaaaaatcaatgtacatagttccgcttagatcccttgccatggaaaagtat
gaggagcttttaaatttaagatcattaaatatgagaataacaatatccataggtgattat
gattcaccaccatcatttataaaaaacaacgatgttattgttgttacctccgaacgtgcc
gactcaatgatacatcatgatcctgatataataaacgattttggtgccatcatagcagat
gagatacatattataaacgatgaggatcgcggcccaagactggaaaccgtgctttcatcg
ataagggtaataaatccagatgccctaatactgggactttccgcaaccatatcaaacgtt
aatgagcttgcccagtggctaaatgcatccactgttgtatcaaatttcagggcggttcca
cttgagctgggaataatatacaaaaagcgtctaattacagacagctatgaaagatatctt
gggcagcttgatgagttatcattgataaaggatattataaacgatggcgggcaggccctg
gtttttagaaactcaaggaaaaacgccgaaaaatatgcagagatgctaattcagcatctt
cctgaatttaatgattttaataatgatggcatgcctgaaagccttgtaaaaatgataagg
catggaatagcctatcaccatgcaggattatcaaatgaggatagaagaaacatagaggaa
atgtttaaaaatggatacataaaggtcatatctgcaacacccacactggctgcgggagtt
aacctgcctgcaagactggtaatcataagggatataaccaggtattctaatggatacagc
aggccaatatcaaacatagagatacagcagatgcttggacgtgccggaaggccaaagtat
gataaaatgggctatggttatatatatgcggcatcgccagcatcttatgatgctgcaaaa
aaggcactttccggtgaacctgaacctgtaatatcaaaaatggattcacaaagattaatg
cgttttaatatccttgccttgatatcatcaggcatggcatccaggatggaggatcttata
ctgttttacaatgaaacgctcatggcaatacagaaggacgttgatgattattatatagaa
agcgcactgtacttccttaaggagaatggttttattgatggtgatgtaacatataatgcc
acaagacttggcaggctcacaagcgatctttacatagatccggaaacggcattgatcctg
aaaagtgcgcttgatcatgattacgatgaaaaactttatctttattatatatgtagaacg
ccggacatgattaatataccggcaggaacaagggaatatgaatacattgaggatttcctt
gaggatataaatgtttttgatttcagcgaggaatctttaagtgctgcaaaaacagccatg
gttttattgggctggatcaatgagatgccaatgcagaagataacggatacatataacatc
ggccccggtgacgttcagcagaaagcttcctcagcagactggatttcatattcattatac
aggctatcttccgtttataaaaaggagatggaatctaaactgtttcacttaaatattaga
ataaaggagggtataaaaccagatttaatagatctaataaagataccaaaggttggcagg
gtaagggccagaaggctttacgataatggatttaaaaccgttgatgatatagcaagatcc
agtccagagaatatagaaaagatcttcggcttctcaaaaaatcttgccgctgaaatagtg
aatagcgcaatgaagataagctcaatgtattacagatcacaatga
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