Pseudomonas tolaasii: I7845_05090
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Entry
I7845_05090 CDS
T08975
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I7845_05090 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptol03019
]
I7845_05090 (rhlB)
Enzymes [BR:
ptol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I7845_05090 (rhlB)
Messenger RNA biogenesis [BR:
ptol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I7845_05090 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ig_halo_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QXQ21567
LinkDB
All DBs
Position
complement(1155141..1156619)
Genome browser
AA seq
492 aa
AA seq
DB search
MTVLKALKKMFGKSEAEPLAPVATAPVPTPGSRNDAKQSDRTAPVASAKKPPVTPPEPKT
AGVAAAPVVAPAPKAARRERAPKPPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQD
LGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPR
ALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRL
LDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDV
MNLAKQWTTDPSIVEIEAENVASENVEQHIYAVAGADKYKLLYNLVNDNGWERVMVFANR
KDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGI
SHVINFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGRKISCETPP
THLLRAVERKRP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtgctcaaagcacttaagaagatgttcggcaaaagcgaggctgagccgctcgcg
cctgttgccactgctcctgtccccacgcccggcagccgcaatgacgctaaacagtccgac
cggaccgcacctgtcgcttctgcgaaaaagccgccggtgacaccgccagagccgaaaacc
gccggggttgccgccgctcctgtcgtggcacccgcgcccaaagcggctcgccgcgagcgc
gcgccaaagccgccggtgatcccatggaagctcgaagacttcgtcgtcgagccccaggaa
ggcaaaacccgcttccatgacttcaagctcgctccggaactgatgcacgccatccaggac
ctgggcttcccgtattgcacgccgattcaggcgcaggtattgggcttcaccctcgccggc
aaagacgccatcggccgcgctcagaccggcaccggcaaaaccgccgccttcctgatttcg
atcatcacccagttgctgcaaacgccaccgcccaaggaacgctacatgggcgagccgcgc
gcactgatcatcgcgccaacccgcgaactggtggtgcagatcgccaaggacgcggccgac
ctgaccaagtacaccggcctcaacgtgatgacgttcgtgggcggcatggacttcgacaag
cagctcaagcacctcgaagcccgccattgcgacatcctggtcgccaccccgggccgcctg
ctggacttcaaccagcgcggcgacgtgcacctggacatggtcgaagtgatggtgctggac
gaagccgaccgcatgctcgacatgggcttcatcccgcaagtgcgtcagatcattcgccag
accccgccgaaatccgagcgccagaccctgctgttctccgccaccttcaccgatgacgtg
atgaacctggccaagcaatggaccaccgacccgtccatcgtcgagatcgaagcggaaaac
gtggccagcgaaaacgtcgagcaacacatctacgccgtggccggtgccgacaaatacaag
ctgctctacaacctggtcaacgacaacggctgggagcgcgtgatggtgttcgccaaccgc
aaggacgaagtgcggcgcatcgaagaacgcctggtgcgcgatggcgtcaacgctgcgcag
ctgtcaggcgatgtgccgcagcacaaacgcatcaagaccctggaaggtttccgcgagggc
aagattcgcgtgctggtggccaccgacgtggccgggcgcggcattcacatcgacggtatc
agccacgtgatcaacttcaccctgccggaagtaccggacgattacgtgcaccgcatcggc
cgtaccggccgtgcaggcgcggccggtgtgtcgatcagctttgccggcgaagatgactcg
taccagttgccgtcgatcgaagcgctgctgggccgcaagatcagctgcgaaacgccgccg
acgcacctgttgcgggctgtggagcgcaagcgcccttaa
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