Pseudomonas tolaasii: I7845_06390
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Entry
I7845_06390 CDS
T08975
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol03030
DNA replication
ptol03430
Mismatch repair
ptol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I7845_06390 (dnaE)
03430 Mismatch repair
I7845_06390 (dnaE)
03440 Homologous recombination
I7845_06390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptol03032
]
I7845_06390 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptol03400
]
I7845_06390 (dnaE)
Enzymes [BR:
ptol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I7845_06390 (dnaE)
DNA replication proteins [BR:
ptol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I7845_06390 (dnaE)
DNA repair and recombination proteins [BR:
ptol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I7845_06390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXQ20048
LinkDB
All DBs
Position
1435800..1439321
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIERDWV
AEASEGLIMLSAAKEGEIGIALLGGNPHEAEVLAAEWMQVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SAEEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPRDTTEDYEARRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKIDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQNGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggtcgacggcctg
gtgcggatcaaaccgctggtcaaaaccctggtgggcatgaacatgcctgcggtggcggtg
accgatcagaacaacatgtgttccctggtcaagttctacaagaacgccatgggcgccggc
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaagacccggataaccccctg
agccgcatcagcctgctggcgatgaacggcgtgggttatcgcaacctcactgaattgatt
tcccgcggttttatcgatggccagcgcaatggctcgatcatcatcgagcgtgactgggtg
gctgaggccagcgaaggtctgatcatgctgtcggccgccaaagagggcgaaatcggtatc
gcgctgctgggcggcaaccctcacgaggccgaagtgctggcggctgaatggatgcaggtc
ttccccgaccgcttctacctggaagtccagcgcaccaaccgccccaacgatgaagagcat
ctgcacgccgccgtggccctggccgacaagctgggcgcgccgctggtggcgaccaacgat
gtgcgttttatcaagaaagaagatttcgaggctcacgaaacccgcgtgtgcatcggcgaa
ggccgggcgctggacgatccacgtcgttcgaagaattacagcgaagagcagtacctcaaa
agcgccgaggaaatggccgagctgttcagcgatctgcccgaggcgctggaaaactccgtc
gagattgccaagcgctgcaacattgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgactatcgacgagtacttccgcaaggtctcgttcgacggcctg
gaagagcggcttgccgtcctgctgccccgggacaccaccgaagactacgaggccaggcgt
caggtttacgttgatcggctgaatttcgagctggatatcattatccagatggggttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgcccgtt
ggccctggccgggggtcaggtgccggttcgctggtggcctatgtgcagaagatcaccgac
cttgacccgctggaatatgacctgctgttcgaacggttcctgaacccggaacgggtttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgaatacgtg
gccgagaaatatggccgcaatgctgtaagccagatcatcacattcggttccatggcggca
aaagctgtaatccgtgacgtggcgcgggtgcagggcaagtcctacggcctggcggaccga
ctgtcgaagatgattccgttcgaagtcggcatgacgctggaaaaagcctacgagcaggaa
gaaatcctgcgtgacttcatcaagatcgatgaagaggccgccgaaatctgggacatggcg
cgcaagcttgaaggggtggtgcgtaacgtcggtaagcacgccggtggtgtggtaattgct
cctacaaagctcaccgacttttcgccgatctattgcgacgaagaaggcgacggcctggtg
acccagttcgacaaggacgacgtagaggcggccggcctggtgaagttcgacttcctcggc
ctgcggaccctgacgatcatcgactgggcgctcaagaccatcaaccgcgaccgcgcgaag
gtgggcgaggaaccgctggacatcgctttcatcccgctggacgacaaaccgacctacacc
ctgctgcaaaaagccgaaaccacggcggtgttccagcttgaatcccgcggtatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgcccgggcccattgcaatcgggcatggtggatgacttcatcaaccgcaagcacggccgt
gccgagctggcgtacccgcactccgactatcaatacgaaggcctcaagcccgtattggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggct
ggttacacccttggcggcgcggacatgctgcgtcgagcgatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggctttattgaaggttgcgcgaccaataacatcgacgcg
gacctggccggtaacattttcgacctggtggaaaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagaccgcatggctaaaggcccactac
ccggcgccgttcatggccgcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcaccatgaagttgcgcctcgacgcgccggacgtgaacgcc
tcggagttcaagttcacggtgaacgacgaaggccgcatcatttatggcctgggcgcgatc
aaaggtgtgggcgaaggcccggtggaagccatcaccgaagcgcgccagaacgggccattc
aaggatctgttcgacttctgcgcgcgggttgacctcaagcgcatcaataaacgtaccctc
gatgggctgatccgtagcggtgcacttgaccgtctcggcccgtatttccacgacgagcca
aaggcttatcaagcgaatatcgaccgcaaccgcgcggtgttgctcgccgcgatggaagaa
gcgatcaaggccgccgaacagactgcccgtacccatgacagcggccacgccgacctgttt
ggcggtttgttcgtggaagaagatgccgatgtgtacggtaaccaccgcaaggccaaggag
ctgacgctcaaggaacgtctcaagggcgaaaaagacaccctgggcctgtacctcaccggc
cacccgattgatgaatacgagggtgaaatccgccgtttcgcccgtcagcgcatcatcgac
ctgaaaccggcgcgcgacacccagaccgtcgccggcatgatcattgccttgcgggtgatg
aagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgctcgggccgtatc
gaagcgtcgctgtttgctgacgcgttccactccgcgcagtcgctgctgcagaccgacgcc
atggtggtggtggaaggcgaggtcagtaacgacgacttctccggcggcctgcgcctgcgg
atcaagcgggtgatgagcatggaagatgcgcgcaccaacctggcggaaagcctgcgtttg
aaggtcaagaccgaagccctcaagggcgatcagctacgctggttgggtgacctgctcaag
cgccaccgtggtgcgtgcccggtgaccatggagtacaccggcaatgacgccaaggccatg
ttgcagtttggcgagacgtggcgaattgatcctgctgatggcttgattcaagcattgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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