Pseudomonas tolaasii: I7845_12625
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Entry
I7845_12625 CDS
T08975
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02025
Biofilm formation - Pseudomonas aeruginosa
ptol03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I7845_12625 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I7845_12625 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptol02044
]
I7845_12625 (tssM)
Secretion system [BR:
ptol02044
]
Type VI secretion system
Imp/Vas secretion system core components
I7845_12625 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXQ21210
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All DBs
Position
2835263..2838616
Genome browser
AA seq
1117 aa
AA seq
DB search
MNAFFKKAGAVLSRIWVWSLLVVLACTVLVWWVGPLLAVNDYRFLQGTTARLVTMCTLFF
LWGLAMALFGGRRTTPVDQYERAEREQQSGRVDAEQVRVRELFKKAIRTLKSTPRDPGSL
ELPWYLLIGEPGSGKTQLLTAAGLQLPFDQTDEVPQGETAHCEWYIADEGVVIDVPGRYL
MQPDNAVDGAGWSTLLSQLGVRRRARPLNGVVVALSMERLLSNNENEVERHARYVHSRLQ
EIQQTLHADVPLYLVLTQADRLPGFNQFFEASPRDTAENVFGQRLDESHTRVDIGQVRHA
FETLLQRLSAQLITRLHQERSVERRGQMLGFAQEAAQIGERLCIFVESAFSTHRNRRING
LRGFYLTCADPGQSRFAEGLFSRVIFAEAGLAGLQVQEQRRLRRRQGLQLAAAALLVGGA
GWMWAHSYSVNQHRLSQLATLADHPSDTAADADPVLALLALLDARLAATQVFPPAGGAGF
MERAGLYQGDLSRPIVTRAYEQALQQQFLREMTAQVEQQVRTRHGSREQRLDDLRAYLML
NLRERRESGWLAQHMAGIWSAGHPGDASVQKRLNTHFARLLEHPFVVPLDTTLVSMAREE
LRGESLADGVYRVLREQSRNLEPLRLGEGKGLLAADPPVPGFYTKRYWQYFEAQGPRLVK
AIAQDNWIMGEAGDLSAMDLRRLMNELQQRYFSEYADVWSEALGRVSLHRTDNLRQNAEQ
LAHLTSAQSPLMQLLQVIAENTRLLPANGLLDKAASQAGALGGMIQSAATEVQTAAFPDS
ARRALQRRFEPLHQLLDEQQNPSAELTQALRLLDELHLQLASLNRESSPEQAAFQRVKRR
MEGQQDVLGNLRDAASRLPLPLAGWFEGVADDSWRHLLEGAYSHVNQRYQSDVYSLYAKA
LRQRYPFNAHATSEVGLHDFQEFFKPQGVMARFYEGYLKPFISVDGSRYRLRGLDGNSLP
VTRSLLDQLTKAQVIRRSFFPEEHGELAVRFTLAPYSLDSSVSRATLSLGDQQLEYRHGP
IVPMTFNWPTEADNGRSSLVLERGTEQRPLGIEKNTGAWSLFRFFDLLQKESASGRNAQV
VKADLAGLRANYLLTTPRTPSPFEMDAWRTFRLPEQL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcttcaagaaggcgggcgctgtgctgagcaggatttgggtttggagcctg
ttagtggtgcttgcctgcacggtgttggtgtggtgggtcgggccgttgctggctgttaac
gactaccggtttttgcagggtactacggcccgccttgtcaccatgtgcacgttgtttttt
ttatgggggttggcaatggccctctttggcggacgccgcacaacgccggttgatcagtac
gagcgcgcggagcgcgagcaacagtcgggacgggtagacgcagaacaggtgcgagtacgt
gagctgttcaagaaggcgatccggacgctcaaatccaccccgcgtgatccaggcagtctt
gaactgccgtggtacctgttgataggggaacctggaagtggaaagacacagttgctgacg
gcggccggcttgcaattgccattcgatcaaacagatgaggtgccacagggagaaacggcg
cattgtgagtggtatatcgccgatgagggcgtcgtgattgatgtgccgggacgttacctg
atgcagcctgacaatgctgtggacggtgcaggatggtcaacgttgttgagccagcttggc
gtgcgacggcgagcgcgcccgcttaacggcgtggtagtcgcgctgtcgatggagaggttg
ctgagcaacaacgaaaacgaagtggagcgtcacgcgcggtatgtgcattcgcgcctgcag
gaaattcagcagacattgcatgccgacgttcccctctatcttgtgttgacccaggccgac
cggcttccggggtttaatcaattcttcgaagcgtcccccagggataccgccgaaaacgtg
ttcgggcaacgtcttgatgagagccacacccgtgttgacattggccaggtgcgccacgcc
ttcgagaccttgttgcaacgattgagcgcgcagttgattacacggttgcatcaggagcgc
agtgtggagcgtcgcggacaaatgctgggttttgcgcaggaagcagcgcaaatcggcgag
cgtttgtgcatctttgtcgaatcggctttttccacgcatcgaaacaggcgcatcaatggt
ttgcgcgggttttacttgacctgcgcagaccctgggcagagtcgctttgccgaagggctg
ttcagtcgggttatcttcgccgaagccggtctcgccggcctccaggttcaggagcaacgt
cgacttcgcaggcgccaggggttgcaattggcggcggcggcattgcttgtcggtggggca
ggatggatgtgggcacacagttattcggtcaaccagcatcggctgtcgcaattggcaaca
ctggccgaccatccttccgatactgcagcagatgccgacccggtcctggcgctcctggcg
ttgctggatgcgcgtctggcggcgactcaggtgttcccgccggcagggggcgccgggttc
atggagcgagccggtctttaccagggggatttgagccgcccgatcgtcacacgcgcctat
gagcaggcgctgcaacagcagttcctgcgcgaaatgactgcacaggttgagcagcaggtg
cgcacccgtcacgggagccgggagcagcggctcgacgatctgcgcgcctatctgatgctc
aatttgcgtgagcgtcgcgagagcggttggctggcgcagcatatggcgggtatctggtct
gcgggtcatccgggcgatgcatccgtgcagaagcgtctgaatacgcattttgcgcggctg
ctggagcacccgtttgtggtgccactcgacacgacgctggtgtcgatggcccgtgaggaa
ctgcgaggcgaatcactggctgatggcgtttaccgggtactgcgcgaacaatcgcgaaac
ctggaaccgctgcgtcttggcgagggtaaagggttattggcggccgacccacctgtaccg
ggcttttacacaaaacggtattggcagtatttcgaggctcaggggccgaggctggtgaaa
gccattgcacaggacaactggataatgggcgaagccggtgacttgagtgccatggatctg
cgtcggttgatgaacgagcttcagcaacgttatttcagtgaatatgccgatgtttggagc
gaggctcttggtcgtgtcagcctgcatcgcacggataacctcaggcagaatgccgagcag
cttgcgcacctgacatccgcccagtcacccttgatgcagctattgcaggtgattgccgaa
aatacccgtctgctgcctgccaacgggctgttggacaaagccgcttcgcaagcaggcgcg
ttgggcgggatgattcagtcggcggcgactgaagtgcaaacagcggcatttcctgactcg
gctcgccgcgcactgcaacggcgttttgagccgctgcatcagttgctggatgaacagcag
aacccaagtgccgagcttactcaagcgttgcgcctgcttgacgagttgcacctgcaactg
gcgtcgctgaaccgggagagttccccggaacaggcagcgttccaaagagtgaagcgccga
atggaggggcagcaggatgtactgggcaacctgcgggacgccgcttcgcgtttgccactg
ccgctagcgggttggttcgaaggggtggctgacgatagttggaggcacttgttggagggc
gcctattcgcacgtcaatcagcgctatcaaagtgatgtgtacagtctttatgccaaagca
ttgcgtcaacgctatcccttcaacgcccatgcgaccagtgaagtcggccttcacgacttt
caagagttcttcaagccgcaaggcgtcatggcacgcttttatgaggggtacctcaaaccc
tttatcagcgttgacggcagccgatacaggctgcgcggtctggacggtaatagcctgccg
gttacacgttcattgctggaccagttgacgaaagcgcaggttatccgtcgcagctttttc
cccgaggaacatggcgaactagccgttcgattcactttggctccctacagcctggactcc
tcggtcagccgtgcgacccttagcctgggcgatcagcaactggaatatcgacatggcccg
attgtgcccatgacgtttaattggcccacggaagccgacaatgggcgcagcagcctggtg
cttgaacgagggacggaacaacggccgctggggattgagaaaaacaccggcgcctggtcg
ctgttcaggttcttcgacttgttgcagaaggagtcagccagcgggcgcaacgcgcaagtc
gtcaaggcagacctcgcggggttgcgcgccaattacctgctgacgaccccgcgcaccccc
agcccgtttgagatggatgcctggcgcactttccggttgccggagcagctatga
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integrated database retrieval system
