Pseudomonas tolaasii: I7845_16160
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Entry
I7845_16160 CDS
T08975
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol00300
Lysine biosynthesis
ptol00470
D-Amino acid metabolism
ptol01100
Metabolic pathways
ptol01110
Biosynthesis of secondary metabolites
ptol01120
Microbial metabolism in diverse environments
ptol01230
Biosynthesis of amino acids
Module
ptol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I7845_16160 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I7845_16160 (dapF)
Enzymes [BR:
ptol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I7845_16160 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXQ16443
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All DBs
Position
complement(3689552..3690355)
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AA seq
267 aa
AA seq
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MTLPFVKMHAHGDDFIIIDRRGQSDPITAAIARKLGNRHTGIGFNQMAVILDCEDAAARI
KFWNPNGTPLQTCGSATRGVADRLMCEAGSHSVVLRTDRGLLACTREDGRRVSVDMGVPS
LDWADVPLAGAMDTRLLPLDGNPAACSMGNPHLTFFVDDIAAIDVAAAGSALETHPLFPA
RTNVHFVQVLSRDHIRLRIWERGGGVPLGSGSCCCGAVINGIRRGLLNERVDVQCDGGTV
TVQWDGKGGVILTGSVEPVMQGNAYVN
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgccattcgtgaagatgcacgcccatggtgacgacttcatcatcattgatcgc
cgtggccaaagcgacccgatcaccgcggccatcgcccgcaagctgggcaaccgccatacc
ggcatcggcttcaaccagatggcggtgatactcgactgcgaagacgccgccgcccgcatc
aaattctggaaccccaacggcacgcccctgcaaacctgcggcagcgccacccggggcgtg
gccgaccgcttgatgtgtgaagccggcagccactcggtcgtactgcgcaccgaccgtggc
ttgctggcctgcacgcgcgaggacgggcgacgggtgtcggtggacatgggcgtgccgtcg
ctggattgggccgacgtgccattggccggcgccatggacacgcgcttgttgcccctcgac
ggcaacccggcagcgtgcagcatgggcaacccgcacctcacgttttttgtggacgacatc
gccgccatcgacgtggccgccgcaggctccgcactggaaactcacccgctgtttccagcc
aggaccaatgtgcatttcgtgcaagtgctgagccgtgaccatattcgcctgcgcatttgg
gagcgtggcggcggcgtgccgttgggctcgggttcatgctgctgcggcgcggtgatcaat
ggcattcggcgcgggctgctgaacgagcgggtagacgtgcaatgcgacggcggcacggtc
acggtgcagtgggacgggaagggcggcgtgatactgaccggcagcgtcgagccggtgatg
cagggcaacgcctacgtgaattaa
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