Pseudomonas tolaasii: I7845_17770
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Entry
I7845_17770 CDS
T08975
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02025
Biofilm formation - Pseudomonas aeruginosa
ptol03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I7845_17770 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I7845_17770 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptol02044
]
I7845_17770 (tssM)
Secretion system [BR:
ptol02044
]
Type VI secretion system
Imp/Vas secretion system core components
I7845_17770 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QXQ16750
LinkDB
All DBs
Position
complement(4042908..4046471)
Genome browser
AA seq
1187 aa
AA seq
DB search
MNFSSFFSLLWSPVERFILWLLKPWLLSLIGVALLSLLVWYEGPLLAFNGSEPLAPESRR
WGLIALFVLIWAGYFAWRLWRAWRANRGLMAGVAEAPAVAPGVRETQAEVAELGERMCSA
MAVLRKANPGWKMSGQYLYQLPWYMFVGAPGSGKTTALTHSGLQFPLREAMGSGAIGGVG
GTRHCDWWFTDEAVLLDTAGRYTTQDSYTEVDRAAWGGFLDLLKKYRRQRPVNGVIVALS
VSDLLQQTEAQRQAQALAIRARINELYERLGLRFPVYVIITKCDLLAGFSEFFEHFGRDE
RAQVWGVTFPLAQPPQADTGLASFPGEFDALERQLQRRVLERLQQERDLSRRALLYSFPQ
QFASLGEGLTRFLNTVFEANRYQEPALLRGVYFTSGTQEGSPIDRVLTSLAASFGLGRKV
LAPNVASGRSYFITRLLREVIFKEAGLAGVNHQEQRRRRLLGRAGRITAAAVFVLLLAAM
TISYNRNLQLIADASSAAANVAQLAKALPAEGDVLVTLPLLNAARSLPSGYADTDNSVPL
LSRMGLYQGNKLGAGAITLYRRLLRSTLLPHIVANMENALRRGDASNQEFLYETLRAYLM
LGERQYFDAASVQAWVDVDWRRELPQATPAQLQQLSDHVAALLEADDEAEPVQLDSALIA
KVRLALASMPLSQRIYNRVKRQVDQQHLPELSVNSAVGRDVSSLFTRASGEPLSRGVSGV
YRIAGYRELTDKTPQAVADMAKDSWVLDRQESAQIAGGNPSMQAAVLELYYADYIRQWDT
FLADVHLSPLTSLGQASQVTNALAATDSPLKALLQAVSRETTLDGALTSATSKDTDQRVR
DKIAAATQKLQTALGGDSPAPVAEASANPVDQHFAALHRLVGSGSGPQPLDEVLASLKDA
GQFFDSADAARRSAAPAPSNEVLGRLKRSGDTQPAPLSTLLRDVEAGGTALTLGNEKARL
NALWEATGAPFCRVAIDGRYPLVRSSGRDATADDFGKFFGPGGLMDDFFSKNLAPYVDMS
GSQWRWRSTGVTPLNISQDVLNQFQRGAKLRDMFFVAGARQPSMRFDLKALGADPALTKV
TLDIDGQPVVYDTGTSPDFTSISLPSGKSGGLVRLDTTPALVNPLRSDGPWGWLRMMDKA
AVSAQGEQLQLTFTVEGHRVAYQLRASSVINPFRRDGSESFHCPSSF
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcttcgtttttctcattgttatggtccccggtggagcgctttattctgtgg
ctgctcaaaccgtggttgttgtcgctgatcggcgtggcgctgctgtcgttgctggtgtgg
tacgaaggcccgttgctggcgttcaacggcagcgagccgttggcgccggagtcgcgtcgg
tggggcttgatcgcgctgtttgtgctgatttgggcaggctattttgcctggcgcctgtgg
cgcgcctggcgggccaaccgtggcctgatggccggcgtggccgaggcgcccgcggtggcc
cccggtgtgcgcgaaacccaggccgaagtggccgagctgggcgagcgcatgtgttcggcc
atggcggtgctgcgcaaggccaaccccggctggaagatgagcgggcagtatttgtatcag
ctgccgtggtacatgtttgtcggcgcaccgggcagcggcaagaccacggcgctgacccat
tccggcctgcagtttcccctgcgtgaggccatgggcagcggtgccatcggcggtgtgggc
ggtacgcggcattgcgactggtggttcaccgacgaagcggtgttgctcgacaccgctggg
cgctacaccacccaggacagctacaccgaagtggaccgtgcggcctggggcgggtttctc
gacctgctgaaaaagtaccgtcgccaacgcccggtcaacggtgtgattgtcgcgttgagc
gtcagcgacctgctgcaacagaccgaagcccaacgccaggctcaggccttggcgattcgc
gcgcgcatcaacgagttgtatgagcgcctgggcctgcgcttcccggtgtatgtgattatc
accaagtgcgatttgctcgcgggcttctcggagtttttcgagcacttcggccgtgatgag
cgcgcgcaagtgtggggcgtgacgttcccgctggcacaaccaccacaggccgataccggc
ctcgcgtcgttccccggcgaattcgatgcgctggagcgccaactgcagcggcgcgtgctg
gagcgtttgcagcaggagcgcgacctgtcgcgccgcgccttgctctacagctttccgcaa
cagttcgccagcctcggcgagggcctgacacgctttctcaataccgtgttcgaagccaac
cgttatcaggaaccggcgttgctgcgcggggtgtatttcaccagcggcacccaggaaggc
agcccgattgatcgcgtgctgacgtcgctggcggcgtcgtttggcctgggtcgcaaggtg
ttggcgcccaatgtggccagcgggcgcagctacttcatcacccgtttgctgcgtgaggtg
attttcaaggaggccgggctggccggggttaatcatcaggaacagcggcgtcggcgtttg
ctcggccgggccgggcggatcacggcggcggcggtgttcgtgctgctgctggcggcgatg
accatcagctacaaccgcaacctgcaactgatcgccgatgcgtcgagcgccgctgccaat
gtcgcgcaactggccaaggcgctgcccgccgaaggcgatgtgctggtgacgttgccattg
cttaacgctgcgcgcagcttgccgagcggttacgccgacaccgacaacagcgtgccgctg
ctcagccgcatgggtctgtaccagggcaacaagctgggtgcaggggcgatcaccttgtat
cgccgtctgctgcgcagtacgctgctgccgcacatcgtcgccaatatggaaaacgcattg
cgccggggggatgcaagcaatcaggagttcctctacgaaaccctgcgcgcctacctgatg
ctcggcgaacggcagtacttcgatgcggcctccgtgcaggcctgggtcgatgtggattgg
cgccgcgaactgccgcaggccacgcccgcgcagttgcagcagctgtcggaccatgtggcg
gcgctgctggaagctgacgacgaggccgaaccggtgcaactggacagcgcgttgatcgcc
aaggtgcgcctggcgctggcgagcatgccgctgtcccagcgcatctataaccgtgtgaaa
cgccaggtggatcagcagcatttgccggagttgagcgtcaacagcgcggtggggcgggac
gtatcgtcgctgtttacccgcgccagtggtgagccgttgtcccgtggggtcagcggcgtg
taccggatcgccggttaccgtgagctgaccgacaagaccccgcaagccgtggccgacatg
gccaaggacagttgggtacttgatcgccaggagtcggcgcagattgccggcggcaacccg
tccatgcaggcggcggtgctggagctgtattacgccgattacatccgccagtgggacacg
tttctggccgacgtgcacctgtcgcccttgaccagcctgggccaggcgtcccaggtgacc
aatgcgctggccgccaccgattcaccgctgaaggctttgctgcaggccgtctccagggaa
accaccctggacggcgccctgacttcggccaccagcaaagacaccgaccagcgcgtgcgc
gacaagatcgccgccgccacccagaagctgcaaacggccctgggcggcgacagcccggcg
ccggtggcggaggcttcggccaacccggtggaccagcattttgccgcgttgcatcgcctg
gtgggctcgggcagtggcccgcagccgctggacgaagtactggcgtcgttgaaagacgcc
gggcagtttttcgacagcgccgacgccgcccgtcgcagcgctgcaccggcgccatccaat
gaagtgttggggcgcttgaagcgctcgggcgatacccagccggcacctttgtcgacttta
ctgcgcgatgtggaggccggtggtaccgcgctgacgctgggcaacgaaaaggcccgtttg
aacgcgctgtgggaggccaccggcgcgccgttttgccgagttgccatcgacgggcgttac
ccgttggtgcgcagctccggccgcgatgccactgccgatgacttcggcaaattcttcggc
cccggcggcttgatggatgactttttcagcaagaacctcgcgccttacgtcgacatgagc
ggtagccagtggcgctggcgttcaaccggcgtgacgccgctgaatatctcccaggatgtg
ctcaaccagttccagcgtggcgccaaactgcgcgatatgttttttgtggcgggggcgcgc
cagccgtcgatgcgttttgatctcaaggccctgggggccgacccggcgttgaccaaagtg
acgctggacattgatggccagcccgtggtgtacgacaccggcacttcgccggacttcacc
agcatctccctgcccagcggcaagtctggcgggttggtacgcctggacaccacgccggcg
ctggtcaacccgttgcgcagtgacggcccatggggctggctgcgcatgatggacaaggcg
gcggtcagcgctcagggcgagcaattgcaattgaccttcaccgtggagggccaccgcgtg
gcgtaccagttgcgcgccagcagtgtgatcaacccgttccgccgtgacggctcagagtcg
ttccattgccccagcagcttttaa
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