Pseudomonas tolaasii: I7845_17820
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Entry
I7845_17820 CDS
T08975
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I7845_17820 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptol02044
]
I7845_17820 (tssC)
Secretion system [BR:
ptol02044
]
Type VI secretion system
Imp/Vas secretion system core components
I7845_17820 (tssC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXQ16760
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Position
complement(4059437..4060936)
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AA seq
499 aa
AA seq
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MSTTQSEQPGQLAPATDFDAGDFASLLQKEFKPKTDKAKEAVETAVRTLAEQALHGTNLM
PNDVLGTIEGLIAALDQKLTEQVNHILHHEEFQGVESAWRGLHYLVNNTETDETLKIRVM
NISKNEVHKTLRKFKGVAWDQSPIFKKLYEEEYGQFGGEPYGAFVADYYFNNSAPDVELL
TQMARVSAAAHCPLITAADPSVMLMESWQELANPRDLTKIFQTPEHAAWRSFRASEDSRY
VGLAMPRFLSRAPYGANTNPVEEFDFEETTDAAGARDFTWANAAYAMAVNINRSFKHYGW
CSQIRGIESGGVVEGLPVHTFPTDDGGVDMTCPTEIAISDRREAELAKNGFMPLVHKKNS
DIAAFIGAQSMHKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKERD
DMQVWLNNWIGRYVEHNPATATDADKARKPLAGAEVVVEEIEGNPGYYGAKFFLRPHYQL
EGLTVSLRLVSKLPSTKSN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgacccaatctgaacagccagggcagcttgcccccgccacggattttgacgcc
ggcgacttcgccagcctgttgcaaaaagagttcaagcccaagaccgacaaggccaaagag
gcggtggaaacggcagtgcgcacccttgcggaacaggcgctgcacggcaccaacctgatg
cccaatgacgtgctgggcaccatcgaaggcctgatcgcggccctcgaccagaagctcacc
gaacaggtcaaccacatcctgcaccacgaggaattccagggcgttgaaagcgcctggcgc
ggcctgcattacctggttaacaacaccgagaccgacgagaccctgaaaatccgcgtgatg
aacatctccaagaacgaggtgcacaagacgctgcgcaagttcaagggtgtggcgtgggac
cagagcccgatcttcaagaagctgtatgaagaggaatatggccagttcggcggcgagcca
tacggcgcgttcgtggccgattactacttcaacaacagcgcgccggatgtggagctgctg
acccagatggcccgcgtcagcgccgccgcccactgcccgctgatcaccgccgccgacccg
agcgtgatgctgatggagtcgtggcaggaactggccaacccgcgtgacctgaccaagatt
ttccagaccccggaacacgccgcctggcgcagcttccgcgccagtgaagactcgcgttac
gtgggcctggccatgccgcgcttcctgtcccgcgcaccttacggcgccaacaccaacccg
gtggaagagttcgacttcgaagaaaccaccgacgccgccggtgccagggatttcacctgg
gccaacgctgcctacgccatggctgtgaacatcaaccgttcgttcaaacactacggctgg
tgctcgcagattcgcggcatcgagtccggcggtgtggtggaaggtttgccggtgcacacc
ttcccgacggacgacggcggtgtggacatgacttgcccgaccgaaatcgccatcagcgac
cgccgcgaagccgagctggcgaagaacggtttcatgccactggtgcataaaaagaacagc
gacattgccgcgttcatcggtgcgcaatcgatgcacaaaccggccgagtacgacgacccg
gacgccaccgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacctgccgt
ttcgcccactacttgaagtgcatcgtgcgcgacaagatcggctcgttcaaagagcgcgac
gacatgcaggtgtggctcaacaactggatcggccgctacgtggaacacaacccggccacg
gccaccgatgccgacaaggcgcgcaaaccgctggccggcgctgaagtggtggttgaagaa
atcgaaggtaaccccggctattacggcgccaagttcttcctgcgcccgcactaccagctc
gaaggcctgaccgtgtccctgcgtctggtctccaagctgccgtccaccaaatccaactga
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