Pseudomonas tolaasii: I7845_20675
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Entry
I7845_20675 CDS
T08975
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptol
Pseudomonas tolaasii
Pathway
ptol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I7845_20675 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptol03019
]
I7845_20675 (recQ)
03400 DNA repair and recombination proteins [BR:
ptol03400
]
I7845_20675 (recQ)
Enzymes [BR:
ptol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I7845_20675 (recQ)
Messenger RNA biogenesis [BR:
ptol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I7845_20675 (recQ)
DNA repair and recombination proteins [BR:
ptol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I7845_20675 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
QXQ17289
LinkDB
All DBs
Position
complement(4666361..4668487)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSPEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCIDGVQTWDATEPARQALSTIHRTG
QRYGVGHLVDVLLGKDNEKIRSFGHEKLSVYGIGKARAEGEWRSLFRQMVARNLVDIDIE
GYGGLRLNDSCRPLLKGEVSLELRRDLKPQTTVKSSTSQASQLVRGEEREQWEALRTLRR
KLAQEHSVPPYVIFPDSTLLEMLREQPTTMAEMARVSGVGARKLERYGQAFLEVLGGQAE
APREVADIRHELISLARAGMTPVQIAGQLQCSEKNVYTLLAESIGKQQLSLEQALDLPED
LLGEIQDAFLDGEGELPAVAEIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaggctcaacgcgtcctcaaggacatcttcggctacgacagctttcgtggc
cgccagggtgcgatcattgagcgcgtggccagcggcggtgatgccctggtgctgatgcct
accggcggtggcaagtcgctgtgcttccaggtaccggcgctgttgcgcaacggcctggcg
gtggtggtatcgccgttgatcgcgttgatggatgaccaggtcgccaccctcgaagagttg
ggtgtggccgccgcgtccctgaactccaccctcagccccgagcagcagcgcgacctggcc
gcgcggatcaagcgcggtgaagtgaagatgctttacctcgcgcctgaacgcctggtgcag
ccgcgcatgctggcctttctgcagagcctggaaatcgcgctgtttgccatcgacgaagcc
cactgtgtgtcgcaatggggccatgatttccgccgtgaatatttgcaattgggccagttg
gccgaactgtttcccgatgtgccacgcatcgccctgaccgccaccgccgataagcgtacc
cgcgaagaaatcgtcgagcgcctgcatttgcagaacgccgagcgtttcctgtcgagcttt
gaccgtccgaatattttttaccgcatcgtgcccaaggaacagccgcgcaagcagttgctg
gcgttcctgtccgagcggcgcagcgacgcgggcatcgtctattgtctgtcgcgcaagaag
gtcgatgaagtggccgccttcctgtgcgagcagggctacccggcgctgccttaccacgcc
ggtctgcccaatgatctgcgcgcctaccaccagaagcgcttcctcaatgaggaaggcctg
atcatggtggccaccattgcattcggaatgggcatcgacaaatccaacgtacgctttgtt
gcgcacatggacctgcccaaatccctcgaggcttattaccaggaaaccggccgcgccggt
cgtgatggcctgcccgcggatgcctggatggtctatggcctgcaagacgtggtgatgctc
aagcaaatgctgcaaaactccgaaggtgacgagcgccacaagcgtctggagcagcacaag
ctcgacgccatgctctcgttgtgtgaagagacccgctgccgccggcaaacgctgctggcg
tacttcgatgaagacatgcccgaaccctgcgggcactgcgataactgcatcgatggcgtg
caaacctgggatgcgaccgaacctgcgcgtcaggcgttgtcgaccattcaccgcaccggc
caacgctacggggtgggccacctggtggacgtgttgctgggcaaggacaacgaaaaaata
cgcagcttcggccacgaaaaactctcggtctacggcatcggcaaagcccgtgcagaaggc
gagtggcggtcgttgttccgccagatggtcgcgcgcaatctggtggacatcgacattgaa
gggtatggcggcctgcgtttgaacgacagttgccggccgttgctcaagggcgaagtgagc
cttgaactgcgccgcgacctcaagccgcaaaccaccgtcaagagcagcaccagccaggcc
agccagctggtgcgtggcgaggagcgcgaacagtgggaagccttgcgcacgctgcgccgc
aaactggcgcaggaacacagtgtgccgccttacgttattttccccgactccaccttgctg
gaaatgctgcgcgagcagccaaccaccatggccgagatggccagggtcagtggcgtcggt
gcgcgcaagctggagcgttacggtcaggcgttcctcgaggtgctcggcgggcaggctgaa
gcgcccagggaggtcgccgatattcgccacgagctgatcagtttggcgcgtgccggcatg
accccggtccagatcgccggtcagcttcaatgctcggaaaaaaacgtctacaccttgctt
gccgaatcgatcggcaagcagcagttgtcgttggagcaggctcttgatttgccggaagat
ttactcggtgaaatccaggacgctttcctcgacggagaaggcgaattgccagcagttgcg
gaaatcgcaccgctgtttaccggacgtgttcctgagggtgttttgtactgtgtgcgagcc
gctttgcagtccgaattcgaaatttaa
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